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Os01g0837500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ruvbl1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0133) R2 : 0.702
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.13 (0.0347) R2dC : 0.7 R2C : 0.699
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0544 (0.0279) R2dN8 : 0.00321 R2N8 : 0.00207
σ : 0.25
deviance : 28.6
__
_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.49 0.223 9.34 0.509 1.22 -0.245 -0.157 1.18 0.0704 17.7 24.92 2221 -- --
24.11 0.229 9.34 0.419 1.14 -0.19 0.0118 -- 0.0368 17.6 30.44 4245 -- --
22.53 0.221 9.34 0.51 1.22 -0.248 -- 1.16 0.0728 17.7 24.73 2202 -- --
24.02 0.228 9.36 0.405 1.14 -0.193 -- -- 0.00939 17.7 32.83 4231 -- --
74.41 0.402 9.3 0.554 -- 0.886 -- 0.823 -0.0689 -- 0.8798 7889 -- --
25.05 0.235 9.36 0.365 1.14 -- 0.137 -- -0.0144 17.6 -- -- -- --
25.1 0.235 9.36 0.364 1.14 -- -- -- -0.0138 17.6 -- -- -- --
76.38 0.407 9.3 0.277 -- 1.03 -- -- -0.0332 -- 1.11 7909 -- --
25.83 0.237 9.36 -- 1.11 -0.238 -- -- 0.0114 17.7 39.99 35983 -- --
92.6 0.45 9.34 0.328 -- -- -- -- -0.0412 -- -- -- -- --
28.6 0.25 9.37 -- 1.13 -- -- -- -0.0544 17.7 -- -- -- --
75.41 0.404 9.31 -- -- 1.1 -- -- -0.169 -- 1.083 7914 -- --
95.43 0.456 9.35 -- -- -- -- -- -0.0776 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.44 temperature 15.0 4320 > th dose independent rect. 7 2
2 21.47 temperature 15.0 270 > th dose independent rect. 2 23
4 21.67 temperature 15.0 270 > th dose independent rect. 18 13
6 21.80 temperature 15.0 270 > th dose independent rect. 3 20
8 21.89 temperature 15.0 720 > th dose independent rect. 10 7
9 21.89 humidity 80.0 10 > th dose dependent rect. 23 19
11 21.92 radiation 1.0 90 < th dose independent rect. 23 19
12 21.94 humidity 80.0 10 > th dose dependent rect. 23 17
14 21.94 radiation 1.0 90 < th dose dependent rect. 23 19
15 21.95 temperature 15.0 720 > th dose independent rect. 4 18
17 21.97 temperature 15.0 1440 > th dose independent rect. 7 6
19 22.01 radiation 1.0 1440 > th dose independent rect. 9 4
20 22.01 radiation 1.0 1440 < th dose independent rect. 9 4
22 22.01 radiation 1.0 1440 < th dose dependent rect. 9 4
29 22.04 temperature 10.0 90 > th dose dependent rect. 19 13
30 22.04 humidity 80.0 10 > th dose dependent rect. 23 15
36 22.07 temperature 15.0 90 > th dose independent rect. 7 23
43 22.10 radiation 1.0 1440 < th dose independent rect. 8 6
44 22.10 radiation 1.0 1440 < th dose dependent rect. 8 6
49 22.11 humidity 80.0 10 > th dose dependent rect. 23 13
52 22.14 radiation 10.0 30 > th dose independent rect. 6 2
77 22.18 precipitation 0.1 1440 > th dose independent rect. 2 1
81 22.18 precipitation 0.1 1440 > th dose dependent rect. 2 1
85 22.19 atmosphere 1015.0 1440 < th dose independent rect. 2 5
89 22.21 atmosphere 995.0 270 > th dose dependent rect. 23 4
90 22.21 temperature 10.0 10 > th dose dependent rect. 20 13
101 22.27 atmosphere 1000.0 270 > th dose independent rect. 23 4
105 22.28 humidity 90.0 720 < th dose independent rect. 10 6
116 22.30 humidity 90.0 90 < th dose independent rect. 6 2
117 22.30 atmosphere 1000.0 270 > th dose independent rect. 22 6
124 22.31 atmosphere 995.0 270 > th dose dependent rect. 22 6
128 22.33 temperature 15.0 90 > th dose independent rect. 6 17
130 22.33 humidity 80.0 1440 > th dose dependent rect. 9 5
134 22.35 radiation 1.0 90 < th dose independent rect. 23 8
138 22.37 humidity 90.0 10 < th dose independent rect. 6 2
140 22.37 temperature 15.0 720 > th dose independent rect. 10 13
141 22.37 humidity 90.0 30 > th dose independent rect. 23 19
153 22.39 radiation 1.0 90 < th dose independent rect. 23 12
157 22.40 radiation 30.0 4320 < th dose independent rect. 2 5
160 22.40 precipitation 0.1 1440 < th dose independent rect. 20 7
161 22.40 humidity 90.0 30 > th dose independent rect. 23 13
168 22.40 radiation 1.0 90 > th dose dependent rect. 6 1
171 22.40 precipitation 0.1 1440 < th dose dependent rect. 20 7
185 22.42 humidity 90.0 90 < th dose independent rect. 19 13
189 22.42 radiation 1.0 90 < th dose dependent rect. 23 12
205 22.44 radiation 1.0 30 > th dose dependent rect. 5 3
212 22.44 radiation 1.0 90 < th dose dependent rect. 23 8
236 22.47 humidity 90.0 10 < th dose dependent rect. 6 2
242 22.48 temperature 15.0 1440 > th dose independent rect. 7 10
252 22.50 temperature 15.0 720 > th dose independent rect. 10 21
254 22.50 radiation 1.0 90 < th dose dependent sin 5 NA
272 22.51 temperature 15.0 1440 > th dose independent rect. 13 17
275 22.51 atmosphere 995.0 10 > th dose dependent rect. 24 6
287 22.53 humidity 90.0 1440 < th dose independent rect. 11 3
294 22.54 temperature 30.0 90 < th dose dependent rect. 23 6
296 22.55 temperature 15.0 10 > th dose independent rect. 20 13
299 22.56 temperature 15.0 720 > th dose independent rect. 19 3
301 22.56 temperature 15.0 720 > th dose independent rect. 11 11
308 22.57 humidity 80.0 1440 > th dose dependent rect. 11 3
311 22.58 radiation 1.0 90 > th dose independent sin 6 NA
317 22.58 temperature 30.0 270 < th dose dependent rect. 23 4
320 22.59 radiation 1.0 90 < th dose independent sin 6 NA
325 22.59 temperature 25.0 30 > th dose dependent rect. 20 12
331 22.60 humidity 70.0 30 > th dose dependent rect. 23 7
332 22.60 atmosphere 1005.0 90 < th dose dependent rect. 1 8
355 22.62 wind 7.0 90 < th dose independent rect. 7 23
361 22.62 humidity 80.0 10 > th dose dependent rect. 23 11
377 22.64 radiation 30.0 1440 < th dose independent rect. 11 2
415 22.66 humidity 90.0 10 < th dose dependent rect. 20 12
424 22.67 atmosphere 1005.0 270 < th dose dependent rect. 1 6
426 22.67 atmosphere 1005.0 10 < th dose dependent rect. 24 9
429 22.68 temperature 25.0 10 > th dose independent rect. 6 2
448 22.69 radiation 40.0 1440 < th dose dependent rect. 11 2
471 22.71 radiation 10.0 1440 < th dose independent rect. 15 1
474 22.71 temperature 15.0 90 > th dose independent rect. 5 23
475 22.71 atmosphere 1000.0 270 > th dose dependent rect. 1 1
483 22.72 radiation 20.0 1440 > th dose independent rect. 11 2
484 22.72 precipitation 0.1 1440 > th dose independent rect. 21 6
488 22.72 humidity 60.0 270 > th dose dependent rect. 22 5
490 22.72 precipitation 0.1 1440 > th dose dependent rect. 21 6
494 22.73 radiation 10.0 30 > th dose independent sin 10 NA
497 22.73 humidity 90.0 1440 > th dose independent rect. 11 3
498 22.73 temperature 15.0 720 > th dose independent rect. 13 9
519 22.74 atmosphere 1005.0 270 < th dose dependent rect. 3 4
542 22.76 temperature 15.0 1440 > th dose independent rect. 17 14
553 22.77 humidity 90.0 30 < th dose independent sin 7 NA
560 22.77 temperature 15.0 10 > th dose independent rect. 6 18
561 22.77 temperature 15.0 270 > th dose independent rect. 15 23
569 22.77 humidity 50.0 90 > th dose dependent rect. 23 16
580 22.78 radiation 1.0 1440 > th dose dependent rect. 11 2
583 22.78 atmosphere 1005.0 90 < th dose dependent rect. 3 6
587 22.79 atmosphere 1000.0 270 > th dose independent rect. 1 1
593 22.79 temperature 15.0 1440 > th dose independent rect. 2 5
610 22.79 temperature 30.0 10 < th dose dependent rect. 23 7
640 22.80 atmosphere 1005.0 10 < th dose dependent rect. 4 5
649 22.80 humidity 80.0 30 > th dose dependent rect. 7 23
650 22.81 humidity 90.0 1440 > th dose independent rect. 12 1
656 22.81 radiation 10.0 1440 < th dose dependent sin 22 NA
683 22.82 precipitation 0.1 1440 < th dose independent rect. 7 3
692 22.82 humidity 90.0 30 < th dose independent rect. 19 17
694 22.82 humidity 90.0 30 < th dose independent rect. 18 23
696 22.82 radiation 10.0 1440 < th dose dependent rect. 12 1
697 22.82 precipitation 0.1 1440 < th dose dependent rect. 7 3
700 22.82 wind 9.0 270 < th dose dependent rect. 22 5
706 22.83 wind 1.0 1440 < th dose independent rect. 1 1
711 22.83 radiation 40.0 90 < th dose independent rect. 5 20
712 22.83 temperature 15.0 720 > th dose independent rect. 19 21
714 22.83 radiation 10.0 1440 < th dose dependent rect. 12 5
746 22.84 humidity 90.0 720 > th dose dependent rect. 22 1
769 22.85 temperature 25.0 30 > th dose independent rect. 20 12
775 22.85 temperature 20.0 10 > th dose dependent rect. 6 2
800 22.85 radiation 10.0 1440 < th dose dependent rect. 9 21
801 22.86 temperature 15.0 720 > th dose independent rect. 20 1
803 22.86 humidity 80.0 1440 > th dose independent rect. 9 5
807 22.86 wind 5.0 30 < th dose independent rect. 23 7
813 22.86 humidity 90.0 10 < th dose independent rect. 6 20
826 22.87 wind 5.0 270 < th dose independent rect. 22 5
828 22.87 humidity 90.0 10 < th dose independent rect. 6 6
839 22.87 temperature 10.0 720 > th dose dependent rect. 20 1
906 22.89 humidity 50.0 90 > th dose dependent rect. 23 14
913 22.90 wind 9.0 1440 < th dose independent rect. 11 1
919 22.90 precipitation 0.1 1440 < th dose independent rect. 7 6
932 22.90 precipitation 0.1 1440 < th dose dependent rect. 7 6
944 22.90 radiation 10.0 1440 < th dose dependent rect. 8 17
956 22.91 humidity 90.0 10 < th dose independent rect. 6 18
960 22.91 wind 9.0 1440 > th dose dependent rect. 11 1
968 22.91 wind 9.0 30 < th dose dependent rect. 23 7
974 22.91 wind 9.0 270 < th dose dependent rect. 14 13