Os01g0833100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NLI interacting factor domain containing protein.
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Os01g0833100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NLI interacting factor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.08 | 0.226 | 12.1 | 0.602 | 0.321 | -0.24 | 0.238 | -1.49 | 0.392 | 2.89 | 999 | 7808 | -- | -- |
| 23.83 | 0.227 | 12.1 | 0.669 | 0.347 | -0.415 | 0.294 | -- | 0.371 | 2.6 | 1000 | 12129 | -- | -- |
| 23.27 | 0.225 | 12.1 | 0.597 | 0.323 | -0.238 | -- | -1.5 | 0.391 | 2.93 | 998.9 | 7807 | -- | -- |
| 23.81 | 0.227 | 12.1 | 0.698 | 0.323 | -0.491 | -- | -- | 0.377 | 2.94 | 999.8 | 11755 | -- | -- |
| 29.24 | 0.252 | 12.1 | 0.613 | -- | -0.262 | -- | -1.43 | 0.397 | -- | 998.9 | 7807 | -- | -- |
| 29.1 | 0.253 | 12.1 | 0.593 | 0.325 | -- | 0.246 | -- | 0.422 | 2.88 | -- | -- | -- | -- |
| 29.3 | 0.253 | 12.1 | 0.587 | 0.326 | -- | -- | -- | 0.421 | 2.93 | -- | -- | -- | -- |
| 29.6 | 0.253 | 12.1 | 0.709 | -- | -0.495 | -- | -- | 0.383 | -- | 999.8 | 12148 | -- | -- |
| 35.4 | 0.277 | 12.1 | -- | 0.338 | -0.366 | -- | -- | 0.318 | 2.96 | 999 | 7630 | -- | -- |
| 35.43 | 0.278 | 12.1 | 0.601 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 38.4 | 0.29 | 12.1 | -- | 0.338 | -- | -- | -- | 0.355 | 2.94 | -- | -- | -- | -- |
| 41.79 | 0.301 | 12.1 | -- | -- | -0.378 | -- | -- | 0.321 | -- | 999 | 7595 | -- | -- |
| 44.97 | 0.313 | 12.1 | -- | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.30 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 3 | 22.48 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 4 | 22.50 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 9 | 22.57 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 10 | 22.58 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 16 | 22.62 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 27 | 22.68 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 33 | 22.71 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 52 | 22.79 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 55 | 22.79 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 61 | 22.81 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 65 | 22.84 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 67 | 22.84 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 83 | 22.89 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 100 | 22.95 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 116 | 22.98 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 122 | 22.99 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 132 | 23.00 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 134 | 23.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 158 | 23.02 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 162 | 23.03 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 163 | 23.03 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 177 | 23.04 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 353 | 23.08 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 377 | 23.11 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 391 | 23.12 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 397 | 23.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 417 | 23.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 453 | 23.17 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 458 | 23.18 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 465 | 23.19 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 472 | 23.20 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 473 | 23.20 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 482 | 23.21 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 485 | 23.21 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 490 | 23.23 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 512 | 23.26 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 532 | 23.28 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 630 | 23.33 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 751 | 23.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 774 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 791 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 796 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 800 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 813 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 823 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 827 | 23.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 840 | 23.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 853 | 23.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 867 | 23.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 875 | 23.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 20 |
| 904 | 23.44 | wind | 9.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 969 | 23.47 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 971 | 23.47 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 986 | 23.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 19 |