Os01g0830500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0830500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : 2OG-Fe(II) oxygenase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.92 | 0.407 | 9.61 | 1.16 | 1.28 | 0.423 | -0.472 | 0.722 | 0.786 | 6.08 | 1.329 | 10 | -- | -- |
| 77.69 | 0.411 | 9.62 | 1.15 | 1.29 | 0.463 | -0.798 | -- | 0.802 | 6.33 | 1.667 | 5 | -- | -- |
| 75.24 | 0.407 | 9.61 | 1.15 | 1.29 | 0.42 | -- | 0.794 | 0.79 | 6.06 | 1.749 | 5 | -- | -- |
| 78.91 | 0.414 | 9.61 | 1.17 | 1.29 | 0.461 | -- | -- | 0.797 | 6.23 | 1.8 | 5 | -- | -- |
| 93.94 | 0.451 | 9.58 | 1.35 | -- | 1.18 | -- | 1.92 | 0.744 | -- | 4.9 | 549 | -- | -- |
| 83.59 | 0.429 | 9.62 | 1.13 | 1.31 | -- | -0.0979 | -- | 0.78 | 4.63 | -- | -- | -- | -- |
| 83.61 | 0.428 | 9.62 | 1.14 | 1.31 | -- | -- | -- | 0.78 | 4.62 | -- | -- | -- | -- |
| 79.28 | 0.415 | 9.62 | 1.2 | -- | 1.43 | -- | -- | 0.86 | -- | 3.908 | 577 | -- | -- |
| 114.34 | 0.498 | 9.64 | -- | 1.3 | 0.466 | -- | -- | 0.67 | 6.16 | 7.896 | 5 | -- | -- |
| 175.48 | 0.619 | 9.63 | 1.19 | -- | -- | -- | -- | 0.815 | -- | -- | -- | -- | -- |
| 117.57 | 0.507 | 9.65 | -- | 1.33 | -- | -- | -- | 0.654 | 4.59 | -- | -- | -- | -- |
| 114.85 | 0.499 | 9.65 | -- | -- | 1.44 | -- | -- | 0.748 | -- | 9.48 | 548 | -- | -- |
| 212.55 | 0.68 | 9.66 | -- | -- | -- | -- | -- | 0.683 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.21 | radiation | 10.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 5 | 69.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 13 | 70.44 | radiation | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 19 | 70.55 | radiation | 1.0 | 90 | < th | dose independent | sin | 18 | NA |
| 23 | 70.58 | radiation | 1.0 | 90 | > th | dose independent | sin | 19 | NA |
| 26 | 70.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 13 |
| 32 | 70.72 | radiation | 30.0 | 270 | < th | dose independent | sin | 15 | NA |
| 39 | 70.83 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 6 |
| 41 | 70.86 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 55 | 71.10 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 58 | 71.20 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 78 | 71.42 | temperature | 10.0 | 90 | > th | dose dependent | sin | 20 | NA |
| 92 | 71.55 | radiation | 40.0 | 270 | < th | dose dependent | sin | 18 | NA |
| 97 | 71.60 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 104 | 71.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 118 | 71.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 20 |
| 132 | 71.89 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 22 | 21 |
| 135 | 71.91 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 5 |
| 165 | 72.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 181 | 72.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 187 | 72.22 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 213 | 72.36 | humidity | 90.0 | 10 | < th | dose independent | rect. | 12 | 7 |
| 231 | 72.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 238 | 72.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 243 | 72.51 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 245 | 72.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 14 |
| 264 | 72.59 | temperature | 25.0 | 10 | > th | dose independent | rect. | 12 | 7 |
| 265 | 72.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 14 |
| 268 | 72.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 274 | 72.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 282 | 72.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 286 | 72.65 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 311 | 72.73 | humidity | 50.0 | 720 | > th | dose independent | rect. | 20 | 19 |
| 318 | 72.74 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 344 | 72.82 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 366 | 72.89 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 19 |
| 369 | 72.90 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 7 |
| 374 | 72.91 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 377 | 72.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 5 |
| 383 | 72.93 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 392 | 72.95 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 396 | 72.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 397 | 72.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 398 | 72.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 399 | 72.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 14 |
| 418 | 73.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 19 |
| 419 | 73.02 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 423 | 73.04 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 425 | 73.04 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 426 | 73.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 442 | 73.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 443 | 73.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 10 |
| 445 | 73.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 450 | 73.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 454 | 73.10 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 468 | 73.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 481 | 73.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 19 |
| 493 | 73.19 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 518 | 73.25 | radiation | 1.0 | 90 | > th | dose independent | rect. | 12 | 6 |
| 519 | 73.25 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 525 | 73.26 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 526 | 73.27 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 16 | 9 |
| 536 | 73.29 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 559 | 73.35 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 563 | 73.35 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 588 | 73.41 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 603 | 73.43 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 607 | 73.45 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 12 |
| 627 | 73.49 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 636 | 73.51 | radiation | 10.0 | 90 | < th | dose independent | rect. | 16 | 11 |
| 650 | 73.53 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 15 |
| 658 | 73.54 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 659 | 73.55 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 672 | 73.57 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 686 | 73.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 687 | 73.59 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 696 | 73.60 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 698 | 73.60 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 702 | 73.61 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 716 | 73.63 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 14 |
| 738 | 73.64 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 15 |
| 753 | 73.65 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 759 | 73.66 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 766 | 73.67 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 767 | 73.67 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 784 | 73.68 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 786 | 73.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 806 | 73.73 | radiation | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 810 | 73.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 828 | 73.75 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 840 | 73.77 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 842 | 73.77 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 851 | 73.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 852 | 73.78 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 859 | 73.79 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 897 | 73.82 | radiation | 1.0 | 270 | > th | dose dependent | sin | 21 | NA |
| 903 | 73.83 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 19 | 17 |
| 943 | 73.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 945 | 73.88 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 8 |
| 950 | 73.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 18 |
| 953 | 73.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 18 |
| 962 | 73.91 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 16 |
| 974 | 73.92 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 19 | 8 |
| 984 | 73.92 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |