Os01g0827400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prenylated rab acceptor PRA1 family protein.
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Os01g0827400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Prenylated rab acceptor PRA1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.77 | 0.366 | 9.28 | -0.0381 | 1.16 | 0.477 | 0.297 | -1.24 | 2.15 | 17.6 | 90.63 | 9 | -- | -- |
| 63.51 | 0.374 | 9.26 | -0.0728 | 1.19 | 0.44 | 0.804 | -- | 2.14 | 17.5 | 89.32 | 26 | -- | -- |
| 60.95 | 0.364 | 9.28 | -0.0325 | 1.15 | 0.458 | -- | -1.36 | 2.15 | 17.7 | 90.61 | 8 | -- | -- |
| 64.84 | 0.375 | 9.26 | -0.0606 | 1.19 | 0.368 | -- | -- | 2.14 | 17.6 | 88.39 | 26 | -- | -- |
| 95.24 | 0.455 | 9.29 | 0.0226 | -- | -1.02 | -- | -0.796 | 1.88 | -- | 66.49 | 390 | -- | -- |
| 68.11 | 0.387 | 9.28 | -0.0134 | 1.02 | -- | 0.397 | -- | 2.07 | 18 | -- | -- | -- | -- |
| 68.48 | 0.388 | 9.28 | -0.0173 | 1.02 | -- | -- | -- | 2.07 | 18 | -- | -- | -- | -- |
| 91.16 | 0.445 | 9.27 | -0.00859 | -- | -0.893 | -- | -- | 1.99 | -- | 65.9 | 391 | -- | -- |
| 64.94 | 0.375 | 9.26 | -- | 1.18 | 0.357 | -- | -- | 2.14 | 17.6 | 88.08 | 26 | -- | -- |
| 122.62 | 0.517 | 9.26 | -0.0469 | -- | -- | -- | -- | 2.04 | -- | -- | -- | -- | -- |
| 68.49 | 0.387 | 9.28 | -- | 1.02 | -- | -- | -- | 2.07 | 18 | -- | -- | -- | -- |
| 91.15 | 0.445 | 9.27 | -- | -- | -0.901 | -- | -- | 1.99 | -- | 65 | 388 | -- | -- |
| 122.68 | 0.517 | 9.26 | -- | -- | -- | -- | -- | 2.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.99 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 7 | 55.38 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 10 |
| 8 | 55.38 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 14 |
| 18 | 55.70 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 14 |
| 19 | 55.71 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 10 |
| 28 | 55.88 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 17 |
| 31 | 56.07 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 8 |
| 35 | 56.19 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 17 |
| 45 | 56.62 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 46 | 56.62 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 16 |
| 47 | 56.62 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 16 |
| 51 | 56.67 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 1 |
| 62 | 56.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 65 | 56.87 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 69 | 56.87 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 74 | 56.87 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 75 | 56.87 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 79 | 56.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 16 |
| 90 | 56.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 91 | 56.90 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 8 |
| 92 | 56.90 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 95 | 56.90 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 96 | 56.90 | radiation | 20.0 | 30 | < th | dose independent | rect. | 22 | 8 |
| 99 | 56.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 16 |
| 101 | 56.90 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 16 |
| 104 | 56.92 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 16 |
| 105 | 56.93 | wind | 9.0 | 30 | < th | dose independent | rect. | 22 | 8 |
| 108 | 56.96 | radiation | 1.0 | 90 | > th | dose independent | sin | 9 | NA |
| 129 | 57.03 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 16 |
| 152 | 57.18 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 153 | 57.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 16 |
| 241 | 57.36 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 254 | 57.44 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 21 |
| 263 | 57.49 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 8 |
| 266 | 57.49 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 8 |
| 270 | 57.51 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 4 |
| 285 | 57.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 287 | 57.58 | radiation | 1.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 300 | 57.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 17 |
| 306 | 57.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 360 | 57.91 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 18 |
| 368 | 57.93 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 378 | 57.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 381 | 57.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 384 | 57.97 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 17 |
| 393 | 58.02 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 398 | 58.06 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 18 |
| 402 | 58.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 405 | 58.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 16 |
| 406 | 58.09 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 22 | 8 |
| 410 | 58.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 15 |
| 412 | 58.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 431 | 58.17 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 442 | 58.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 463 | 58.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 470 | 58.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 480 | 58.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 499 | 58.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 16 |
| 525 | 58.46 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 526 | 58.46 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 4 |
| 528 | 58.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 6 |
| 531 | 58.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 536 | 58.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 538 | 58.49 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 571 | 58.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 576 | 58.59 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 8 |
| 615 | 58.62 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 16 |
| 621 | 58.64 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 635 | 58.68 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 639 | 58.70 | temperature | 25.0 | 30 | < th | dose independent | sin | 9 | NA |
| 642 | 58.71 | humidity | 70.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 669 | 58.76 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 685 | 58.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 701 | 58.82 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 708 | 58.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 4 |
| 710 | 58.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 713 | 58.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 714 | 58.84 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 4 |
| 719 | 58.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 728 | 58.85 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 16 |
| 742 | 58.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 756 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 758 | 58.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 759 | 58.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 762 | 58.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 765 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 767 | 58.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 770 | 58.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 775 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 776 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 20 |
| 777 | 58.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 778 | 58.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 5 |
| 804 | 58.95 | radiation | 30.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 822 | 58.96 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 831 | 58.98 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 868 | 59.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 20 |
| 921 | 59.08 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 940 | 59.11 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 4 |
| 948 | 59.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 975 | 59.14 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 980 | 59.14 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 6 | 16 |
| 996 | 59.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 18 |