BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0827400 Os01g0827400|AK108526
(145 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214 130 2e-31
AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210 129 6e-31
AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221 126 5e-30
AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218 123 3e-29
AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224 122 5e-29
AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217 112 9e-26
AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119 77 4e-15
AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190 74 2e-14
AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189 67 3e-12
AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210 64 3e-11
AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188 62 1e-10
AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189 61 2e-10
AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187 53 5e-08
AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183 47 3e-06
>AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214
Length = 213
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 97/139 (69%), Gaps = 5/139 (3%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
L+++ SR+R+NLAYF+VNY VLL++LG W FLY+FR++DQP
Sbjct: 64 LTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQP 123
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+VLFGR+F+DRETLLGLV+ +++ FMTSV SL+ S L +G AIV +HGAFRVP+DLFLD
Sbjct: 124 LVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLD 183
Query: 121 DPSVGSNGNTTSRLLSFLG 139
+ + G LLSF+G
Sbjct: 184 EQEPANAG-----LLSFIG 197
>AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210
Length = 209
Score = 129 bits (324), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 95/138 (68%), Gaps = 5/138 (3%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
L++A SR+R+NLAYF+VNY VL+ +LGGW FLY+FR +DQP
Sbjct: 62 LTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQP 121
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+V+FGRTF+DRETLL LV+++++ FMTSV SL+ S L++G AIV VHGAF VP+DLFLD
Sbjct: 122 LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLD 181
Query: 121 DPSVGSNGNTTSRLLSFL 138
+ + G LLSFL
Sbjct: 182 EQEPANAG-----LLSFL 194
>AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221
Length = 220
Score = 126 bits (316), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
+S+A R+R+N +YF+VNY LL +L W FLY+FR DQP
Sbjct: 72 ISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQP 131
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+VLFGRTF+DRETL L++ S+ F+T V S+++S +++G A++ HGAFR PEDLFLD
Sbjct: 132 IVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLD 191
Query: 121 DPSVGSNGNTTSRLLSFLG 139
+ + G LSFLG
Sbjct: 192 EQEPAATG-----FLSFLG 205
>AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218
Length = 217
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 88/138 (63%), Gaps = 5/138 (3%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
L++A SR+RRNL YF+VNY VLL + W FLY+FR +DQP
Sbjct: 65 LTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQP 124
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+V+ GRTF+DRETL LV+ +++ F+TSV SL+ S L++G IV +HGAFRVPEDLFLD
Sbjct: 125 LVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLD 184
Query: 121 DPSVGSNGNTTSRLLSFL 138
D + G LLSFL
Sbjct: 185 DQEPANTG-----LLSFL 197
>AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224
Length = 223
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
LSEA +R R+N +YFRVNY +LL + W FLY+FR +D+P
Sbjct: 72 LSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRP 131
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
++LFGR+F++ ETL GL+++++ F TSV S++IS L++G A + VHGAFR P+DLFLD
Sbjct: 132 LILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLD 191
Query: 121 DPSVGSNGNTTSRLLSFLGAPG 142
+ ++G LSF+G P
Sbjct: 192 EQDHAASG-----FLSFIGVPA 208
>AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217
Length = 216
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 78/121 (64%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
LSEATSR+R+N +YFR NY +L ++ W FLY FR ADQP
Sbjct: 62 LSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQP 121
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+V+ GRTF+D ETL L +++V+ FMTSV SL++S L VG VA+HGAFR PEDLFL+
Sbjct: 122 LVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLE 181
Query: 121 D 121
+
Sbjct: 182 E 182
>AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119
Length = 118
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 6 SRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQPVVLFG 65
+R +N +YFRVNY +LL + W FLY+FR +D+P++L G
Sbjct: 2 TRFWKNSSYFRVNYVCIIALIISFSLPAHPFSLILLLCLAASWLFLYLFRPSDRPLILIG 61
Query: 66 RTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVG 101
R+F++ ETL GL+++++ F TSV S++IS L++G
Sbjct: 62 RSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIG 97
>AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190
Length = 189
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 3 EATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQPVV 62
+A SR++ NL YFR NY VL ++ W FLY R D+P+V
Sbjct: 56 DAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLV 113
Query: 63 LFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLDD 121
+FG DR L+GL V +V+ +T S I+ LL +V +H A R ++LFLD+
Sbjct: 114 VFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDE 172
>AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189
Length = 188
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
+S+ SR++ NLAYFR NY V ++ W FLY R D P
Sbjct: 54 VSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVP 111
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+ +F DR L+GL V +++ +T+ I++ L+ G +V +H R +DLFLD
Sbjct: 112 LKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLD 171
Query: 121 DPSVGSN 127
+ + +
Sbjct: 172 EEAATTE 178
>AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210
Length = 209
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 3 EATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQPVV 62
EA + L+ N++YFR NY + + GW LY R A+ +V
Sbjct: 67 EAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIV 126
Query: 63 LFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLDDP 122
+ G+ D+ L+ L + +VLA T V ++ L++G IV HGAFR +DLFLD+
Sbjct: 127 ISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEE 186
Query: 123 SVGSNG 128
S G
Sbjct: 187 SARRGG 192
>AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188
Length = 187
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 2 SEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQPV 61
S A SR++ NL +F VNY + + + W LY +R D P+
Sbjct: 57 SPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMALVTVASFVAMWLLLYFYR--DHPL 114
Query: 62 VLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLDD 121
VL+GR +DR + GL++ S+ A + + +I G++ + VH R +DLF+ +
Sbjct: 115 VLYGRHISDRVIVFGLILGSLWALWFINSLQCLILGVVTSVLLCLVHAIIRNSDDLFVQE 174
Query: 122 PSVGSNGN 129
V N
Sbjct: 175 KDVVVPSN 182
>AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189
Length = 188
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
+S+A +R++ NLAYFR+NY V ++ W FLY R D+P
Sbjct: 54 VSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEP 111
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+ LF DR L+ L V +V+ +T+ I+ L+ G +V +H R EDLFLD
Sbjct: 112 IKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLD 171
Query: 121 DPSVGSN 127
+ + +
Sbjct: 172 EEAATTE 178
>AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187
Length = 186
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 7 RLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLL-AILGGWCFLYVFRAADQPVVLFG 65
R + N YF VNY +++ AI+ W + FR + P++L+
Sbjct: 59 RSKTNFNYFFVNYTIIVSTCAAFALITASPVALIVVGAIIALWLIFHFFR--EDPLILWS 116
Query: 66 RTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLDD 121
DR LL LV+ASV A + T+ A + G+ VG + +H FR ++LFL++
Sbjct: 117 FQVGDRTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCIIHAVFRNSDELFLEE 172
>AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183
Length = 182
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 1 LSEATSRLRRNLAYFRVNYXXXXXXXXXXXXXXXXXXXXVLLAILGGWCFLYVFRAADQP 60
+++AT+R+ +NL +FR+NY +A+ W FLY R ++P
Sbjct: 38 IADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIAVGLAWFFLYFAR--EEP 95
Query: 61 VVLFGRTFTDRETLLGLVVASVLAFFMTSVASLIISGLLVGGAIVAVHGAFRVPEDLFLD 120
+ +FG T D + L+ S+ + T V ++ + G ++ +H A R +DL D
Sbjct: 96 LTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVLVLILHAALRGTDDLVSD 155
Query: 121 D 121
D
Sbjct: 156 D 156
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.143 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,408,818
Number of extensions: 80772
Number of successful extensions: 325
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 312
Number of HSP's successfully gapped: 16
Length of query: 145
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 56
Effective length of database: 8,666,545
Effective search space: 485326520
Effective search space used: 485326520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 107 (45.8 bits)