Os01g0826800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0826800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.85 | 0.684 | 6.61 | -1.72 | 1.37 | 2.78 | -1.18 | 1.04 | -0.82 | 20.6 | 21.31 | 1570 | -- | -- |
| 214.47 | 0.682 | 6.6 | -1.78 | 1.34 | 2.65 | -1.04 | -- | -0.768 | 20.4 | 21.5 | 1560 | -- | -- |
| 212.47 | 0.679 | 6.61 | -1.59 | 1.38 | 2.66 | -- | 0.988 | -0.818 | 20.4 | 21.68 | 1543 | -- | -- |
| 211.54 | 0.677 | 6.65 | -1.75 | 1.42 | 2.46 | -- | -- | -0.873 | 20.3 | 21.9 | 1541 | -- | -- |
| 309.59 | 0.819 | 6.58 | -1.76 | -- | 2.72 | -- | 0.957 | -0.866 | -- | 21.7 | 2081 | -- | -- |
| 416.16 | 0.956 | 6.48 | -0.837 | 1.37 | -- | -1.17 | -- | -0.128 | 20.7 | -- | -- | -- | -- |
| 420.52 | 0.96 | 6.48 | -0.798 | 1.38 | -- | -- | -- | -0.126 | 20.5 | -- | -- | -- | -- |
| 309.25 | 0.819 | 6.63 | -2.05 | -- | 2.67 | -- | -- | -0.977 | -- | 21.68 | 2099 | -- | -- |
| 281.6 | 0.782 | 6.59 | -- | 1.4 | 2 | -- | -- | -0.6 | 20.3 | 22 | 1511 | -- | -- |
| 527.06 | 1.07 | 6.44 | -0.803 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 437.28 | 0.978 | 6.46 | -- | 1.38 | -- | -- | -- | -0.0376 | 20.5 | -- | -- | -- | -- |
| 368.06 | 0.894 | 6.55 | -- | -- | 1.91 | -- | -- | -0.594 | -- | 22 | 698 | -- | -- |
| 544.06 | 1.09 | 6.42 | -- | -- | -- | -- | -- | -0.0502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 216.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 12 | 217.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 42 | 219.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 46 | 219.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 20 |
| 52 | 219.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 67 | 219.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 79 | 219.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 21 |
| 119 | 220.55 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 143 | 220.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 360 | 227.19 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 367 | 227.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 377 | 227.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 394 | 228.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 411 | 228.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 414 | 229.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 440 | 229.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 465 | 229.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 506 | 230.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 548 | 231.40 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 600 | 232.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 675 | 233.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 684 | 233.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 748 | 234.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 910 | 236.66 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |