Os01g0819500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-conjugating enzyme E2-17 kDa 11 (EC 6.3.2.19) (Ubiquitin- protein ligase 11) (Ubiquitin carrier protein 11).
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Os01g0819500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-conjugating enzyme E2-17 kDa 11 (EC 6.3.2.19) (Ubiquitin- protein ligase 11) (Ubiquitin carrier protein 11).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.3 | 0.227 | 15 | 0.902 | 0.509 | 0.378 | -0.0751 | 0.0395 | 0.567 | 0.285 | 28.7 | 202 | -- | -- |
| 23.3 | 0.225 | 15 | 0.908 | 0.509 | 0.38 | -0.0716 | -- | 0.568 | 0.284 | 28.7 | 202 | -- | -- |
| 23.32 | 0.225 | 15 | 0.909 | 0.509 | 0.379 | -- | 0.00785 | 0.568 | 0.282 | 28.73 | 202 | -- | -- |
| 23.32 | 0.225 | 15 | 0.91 | 0.509 | 0.379 | -- | -- | 0.568 | 0.283 | 28.73 | 202 | -- | -- |
| 35.4 | 0.277 | 15 | 0.972 | -- | 0.498 | -- | 0.0291 | 0.601 | -- | 28.1 | 107 | -- | -- |
| 28.43 | 0.25 | 15 | 0.839 | 0.652 | -- | -0.0215 | -- | 0.535 | 1.35 | -- | -- | -- | -- |
| 28.43 | 0.25 | 15 | 0.84 | 0.652 | -- | -- | -- | 0.535 | 1.35 | -- | -- | -- | -- |
| 34.84 | 0.275 | 15 | 0.986 | -- | 0.499 | -- | -- | 0.611 | -- | 27.5 | 77 | -- | -- |
| 44.86 | 0.312 | 15 | -- | 0.56 | 0.306 | -- | -- | 0.469 | 0.543 | 28.9 | 267 | -- | -- |
| 54.63 | 0.345 | 15 | 0.865 | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
| 47.02 | 0.321 | 15 | -- | 0.667 | -- | -- | -- | 0.442 | 1.4 | -- | -- | -- | -- |
| 59.75 | 0.361 | 15 | -- | -- | 0.405 | -- | -- | 0.512 | -- | 27.5 | 77 | -- | -- |
| 74.38 | 0.403 | 15 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.60 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 12 |
| 2 | 23.62 | temperature | 25 | 270 | > th | dose dependent | sin | 1 | NA |
| 9 | 23.68 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 55 | 23.89 | temperature | 25 | 90 | > th | dose dependent | sin | 22 | NA |
| 105 | 23.99 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 237 | 24.19 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 312 | 24.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 332 | 24.30 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 463 | 24.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 501 | 24.45 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 550 | 24.51 | radiation | 30 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 653 | 24.60 | temperature | 25 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 722 | 24.67 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 733 | 24.69 | humidity | 60 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 750 | 24.71 | radiation | 40 | 720 | > th | dose independent | rect. | 9 | 2 |
| 831 | 24.77 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 869 | 24.82 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 23 |
| 903 | 24.85 | radiation | 40 | 270 | < th | dose independent | rect. | 17 | 22 |
| 980 | 24.92 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 23 |
| 987 | 24.93 | radiation | 30 | 720 | > th | dose dependent | sin | 10 | NA |