Os01g0813900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZIGA1 protein (Fragment).
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Os01g0813900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ZIGA1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.8 | 0.243 | 11.2 | 0.176 | 1.32 | 0.812 | 0.0329 | 1.2 | 0.365 | 5.04 | 10.37 | 2013 | -- | -- |
| 27.42 | 0.244 | 11.3 | -0.0206 | 1.26 | 0.625 | 0.0217 | -- | 0.316 | 5.1 | 20.77 | 2470 | -- | -- |
| 26.8 | 0.241 | 11.2 | 0.176 | 1.32 | 0.812 | -- | 1.2 | 0.365 | 5.04 | 10.37 | 2012 | -- | -- |
| 27.36 | 0.244 | 11.3 | -0.0577 | 1.25 | 0.639 | -- | -- | 0.306 | 5.1 | 20.76 | 2471 | -- | -- |
| 105.57 | 0.479 | 11.2 | 0.2 | -- | 0.954 | -- | 1.42 | 0.37 | -- | 15.2 | 2690 | -- | -- |
| 39.64 | 0.295 | 11.2 | 0.179 | 1.28 | -- | -0.0195 | -- | 0.448 | 4.84 | -- | -- | -- | -- |
| 39.64 | 0.295 | 11.2 | 0.179 | 1.28 | -- | -- | -- | 0.448 | 4.84 | -- | -- | -- | -- |
| 106.38 | 0.48 | 11.3 | -0.0812 | -- | 0.776 | -- | -- | 0.306 | -- | 21.23 | 2694 | -- | -- |
| 27.45 | 0.244 | 11.3 | -- | 1.25 | 0.632 | -- | -- | 0.313 | 5.1 | 20.59 | 2462 | -- | -- |
| 126.81 | 0.526 | 11.2 | 0.227 | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
| 40.49 | 0.298 | 11.2 | -- | 1.29 | -- | -- | -- | 0.428 | 4.83 | -- | -- | -- | -- |
| 105.3 | 0.478 | 11.3 | -- | -- | 0.769 | -- | -- | 0.292 | -- | 21.02 | 1244 | -- | -- |
| 128.17 | 0.528 | 11.2 | -- | -- | -- | -- | -- | 0.456 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 2 | 25.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 7 | 25.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 13 | 25.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 21 | 25.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 15 |
| 23 | 25.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 26 | 25.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 49 | 25.75 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 128 | 25.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 133 | 25.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 16 |
| 167 | 25.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 16 |
| 205 | 26.05 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 258 | 26.12 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 341 | 26.21 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 347 | 26.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 584 | 26.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 963 | 26.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 989 | 26.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 994 | 26.92 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |