BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0813900 Os01g0813900|AK101729
(801 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652 301 1e-81
AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603 186 3e-47
AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629 182 9e-46
AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484 80 3e-15
AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337 67 3e-11
AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233 64 3e-10
AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460 60 3e-09
AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338 59 9e-09
AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457 59 1e-08
AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396 57 3e-08
AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386 57 4e-08
AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403 52 1e-06
>AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652
Length = 651
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 192/319 (60%), Gaps = 16/319 (5%)
Query: 1 MGSXXXXXXXXXXXXGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRV 60
MGS GLMKLPPNR+CINCNS+GPQYVCT FWTF+C++CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSVSMAKFTTQEVRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKK 120
KSVSM+KFT++EV L+ GGNQRAR+IYLK+WD QR RLP+NSN +R+REFI+ VYV KK
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YAGGKSTDKPVNDSESVKSSENLTRRXXXXXXXXXXXXXDFQYEDRRYGKQVDTLARRPS 180
YAG DKP DS+ SSE++TRR D+QYE+RRYGK + +
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYEERRYGKIPLGFTGKSA 181
Query: 181 DRAFFDGKLGSFLYSPGRLRDQMHEDRFANESTGSRFSDFSASSTGD-IRNDVLSPS-SQ 238
K SF+YSPGR D M ED+F+NE + R SD+S SS GD R+D+ SP+ Q
Sbjct: 182 SVKGLHAKASSFVYSPGRFSDHMFEDQFSNEDSAPRASDYSVSSAGDPFRSDIQSPNFQQ 241
Query: 239 DTGYSSPSIHHSRNVSSENPPSHRHPNATSQIDFNGVRRSQRTXXXXXXXXXXXXXXXNK 298
+ + SP HS SEN F G R+ QRT K
Sbjct: 242 EAEFRSPQFQHSNAPPSENL-------------FPG-RQHQRTTSSGSVRSVDSNFMSIK 287
Query: 299 SVDSGALPDAPTEKPVNSA 317
S SG L +A +E N+
Sbjct: 288 SYTSGGLGEAVSESRQNTG 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 77/369 (20%)
Query: 469 STPPSIDLFAGFDQQLPPTTSVQQSQPAEPSIS---------STPQSIDL-----FAGFD 514
ST IDLF QLP Q +PSI+ PQ+ FAG
Sbjct: 322 STKAPIDLF-----QLPGAPVAQSVDTFQPSIAPRSPPVNLQQAPQTYSFTPANSFAGNL 376
Query: 515 QQLPPTTSVQQSQQAAPLVADEGWAFFLDTPQHVSPTSISNVQAQVATAIAAFPPSESLA 574
Q P + + S+ +AP +EGWA F D P + A +T + P L
Sbjct: 377 GQQPTS---RPSELSAP--KNEGWASF-DNP----------MPAAKSTNVITSPGDFQLE 420
Query: 575 KGTNQSMLPTS----PPNALIPQSYPLMMDQWSLNA----EEVKTPVSKETS---QPWNA 623
+ + P++ PP YP +DQ +L+ +E + V K+ QPWNA
Sbjct: 421 LKIEEILQPSTSMQLPP-------YPSTVDQHALSIPSPWQEDLSNVLKDVVDNPQPWNA 473
Query: 624 FGASTGNTPNDSFTFNTISQVAPNHFNVPSVPH----AEARGPQDLPS--SEPERLTPGD 677
F S P DS + N QV + + H ++ Q+L + ++ R+ G
Sbjct: 474 FPDSIEANPLDS-SRNIHQQVDGASTSSYNTDHQHLESQVLESQELSNDGTQTTRIPAGS 532
Query: 678 ITPGFNVSPGDMA-GPSFRGPLQQQLDIVPSQPAKSTNPFDMAFESDVEASNMFMDLTSL 736
GF PG++ PS+ Q ++ KS NPFD+ ++S+ ++++MF+D++SL
Sbjct: 533 SAFGF---PGNIGMAPSYSEEAWQHVN-----EQKSANPFDLPYDSEFDSNDMFLDMSSL 584
Query: 737 QETLPNPHVNTDYSN-LTESWIPHNSNMPYI--SSGPQGGLSYMATQVQDSLMLNSAQG- 792
Q LP+ + N +++ W+ +S Y+ + QGGL+YMA Q + ++AQG
Sbjct: 585 QGALPDIQTPQAFLNGVSQPWLAADSVPSYLPAPAVAQGGLAYMAGQASTN---SAAQGP 641
Query: 793 -SFPPRNPF 800
+F NPF
Sbjct: 642 VAFTGGNPF 650
>AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603
Length = 602
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 124/205 (60%), Gaps = 29/205 (14%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRVKSVSMAKFTTQEVRSL 76
L+KLP N++CINCNS+GPQYVCT FWTF+C +CSGIHREFTHRVKS+SMAKFT+QEV +L
Sbjct: 18 LLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVTAL 77
Query: 77 EQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKKYAGGKSTDKPVNDSES 136
++GGNQ A+DIY K D QR +PD SN +R+R+FIR VYV+K+Y K+ DK +++ S
Sbjct: 78 KEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNKRYTNEKNDDKSPSETRS 137
Query: 137 VKSSENLTRRXXXXXXXXXXXXXDFQYE---DRRYGKQVDTLARRPSDRAFFDGKLGSF- 192
S + YE DRRYG + R P F G +
Sbjct: 138 SSGSRSPP------------------YEDGYDRRYGDRSSPGGRSP---GFETGSRNAVN 176
Query: 193 -LYSPGR---LRDQMHEDRFANEST 213
SP R L D EDRF T
Sbjct: 177 NRKSPARPEILNDWRREDRFGGRKT 201
>AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629
Length = 628
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 93/113 (82%), Gaps = 3/113 (2%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRVKSVSMAKFTTQEVRSL 76
L+KLP NR+CINCNS+GPQYVC+ FWTF+C++CSGIHREFTHRVKSVSMAKFT EV +L
Sbjct: 14 LLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSVSMAKFTADEVSAL 73
Query: 77 EQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKKYAGGKSTDK 129
GGN+RAR IY K+WD R PD SN ++R+FIR+VYVDK+Y+ S+DK
Sbjct: 74 RAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYS---SSDK 123
>AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484
Length = 483
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 16 GLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQE 72
GL+K P NR+C +C + GP++ N FIC+ CSGIHR +V+S ++ + ++
Sbjct: 21 GLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQ 80
Query: 73 VRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKKYA--GGKSTDKP 130
V ++ GN +A + LP N + I FIRA Y +K++ G K+ P
Sbjct: 81 VAFIQSMGNDKANSYW-------EAELPPNYDRVGIENFIRAKYEEKRWVSRGEKARSPP 133
Query: 131 VNDSESVKSSE 141
+ E KS E
Sbjct: 134 RVEQERRKSVE 144
>AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF-TH--RVKSVSMAKFTTQEV 73
L+ P NR C +C + P++ N FICL C G+HR TH +V SV++ +++ +EV
Sbjct: 21 LLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDEEV 80
Query: 74 RSL-EQGGNQRARDIYLKDWDWQRMRLPDNS-------NPDRIREFIRAVY 116
S+ E GGN A IY LPD N D+ FIRA Y
Sbjct: 81 DSMIEIGGNASANSIY-------EAFLPDTCSKPGPDVNHDQRMRFIRAKY 124
>AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233
Length = 232
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 16 GLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQE 72
L+K P NR+C +C S P++ N FIC+ CSGIHR +V+S+++ + +
Sbjct: 21 ALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSITLDTWLPDQ 80
Query: 73 VRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKKYA 122
V ++ GN + + + + LP + FIRA Y +K++
Sbjct: 81 VAFMKSTGNAKGNEYWESE-------LPQHFERSSSDTFIRAKYSEKRWV 123
>AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460
Length = 459
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHR---VKSVSMAKFTTQEV 73
L P N+ C++C PQ+ ++ F+CL CSG HR V+SV+M ++ ++
Sbjct: 10 LQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQI 69
Query: 74 RSLEQGGNQRARDIY 88
+ +E GGN+R +
Sbjct: 70 KKMEAGGNERLNKFF 84
>AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338
Length = 337
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQEV 73
L+ NR C +C + P++ N FICL C G+HR +V SV++ +++ +EV
Sbjct: 21 LLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSDEEV 80
Query: 74 RSL-EQGGNQRARDIYLKDW-DWQRMRLPDNSNPDRIREFIRAVYVDKKY 121
S+ E GGN A IY + PD S+ R+R FIR+ Y +++
Sbjct: 81 DSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMR-FIRSKYEHQEF 129
>AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457
Length = 456
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHR---VKSVSMAKFTTQEV 73
L P N+ C++C+ PQ+ ++ F+CL CSG HR V+SV+M ++ ++
Sbjct: 10 LQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQI 69
Query: 74 RSLEQGGNQR 83
+ ++ GGN+R
Sbjct: 70 KKMDAGGNER 79
>AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396
Length = 395
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 23 NRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQEVRSLEQG 79
N+ C +CN+ P + + F+C+ CS +HR V+S ++ +++++++ + G
Sbjct: 22 NKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSSEQLKMMIYG 81
Query: 80 GNQRARDIYLKDWDW 94
GN RA+ ++ K + W
Sbjct: 82 GNNRAQ-VFFKQYGW 95
>AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386
Length = 385
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 17 LMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQEV 73
L+K P N+ C +C S P++V + FIC+ CSG+HR +V SV + ++T +V
Sbjct: 53 LLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQV 112
Query: 74 RSL-EQGGNQRARDIY-LKDWDWQRMRLPDNSNPDRIREFIRAVY 116
L GGN + + + D + PD++N +R +FIR Y
Sbjct: 113 DMLVGYGGNTAVNERFEACNIDQSKKPKPDSTNEER-NDFIRKKY 156
>AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403
Length = 402
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 23 NRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF---THRVKSVSMAKFTTQEVRSLEQG 79
N+ C +C++ P + + F+C+ CS +HR V+S ++ ++ +++R++ G
Sbjct: 22 NKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLRTMMFG 81
Query: 80 GNQRARDIYLKDWDW 94
GN RA+ ++ K W
Sbjct: 82 GNNRAQ-VFFKQHGW 95
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.126 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,848,548
Number of extensions: 790467
Number of successful extensions: 2237
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 2235
Number of HSP's successfully gapped: 14
Length of query: 801
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 694
Effective length of database: 8,173,057
Effective search space: 5672101558
Effective search space used: 5672101558
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)