Os01g0806000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0806000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.91 | 0.387 | 6.65 | -1.3 | 0.195 | 2.86 | -0.421 | 0.00874 | 0.485 | 18.4 | 8.589 | 1670 | -- | -- |
| 67.91 | 0.384 | 6.65 | -1.31 | 0.187 | 2.86 | -0.428 | -- | 0.484 | 18.5 | 8.248 | 1680 | -- | -- |
| 68.25 | 0.385 | 6.65 | -1.29 | 0.204 | 2.86 | -- | 0.0273 | 0.486 | 17.7 | 8.526 | 1660 | -- | -- |
| 68.25 | 0.385 | 6.65 | -1.3 | 0.227 | 2.85 | -- | -- | 0.485 | 17.8 | 8.77 | 1630 | -- | -- |
| 69.04 | 0.387 | 6.65 | -1.34 | -- | 2.85 | -- | -0.0604 | 0.47 | -- | 13.75 | 1857 | -- | -- |
| 203.11 | 0.668 | 6.54 | -0.391 | 0.257 | -- | -0.366 | -- | 1.01 | 18.5 | -- | -- | -- | -- |
| 203.43 | 0.668 | 6.54 | -0.385 | 0.257 | -- | -- | -- | 1.01 | 18.3 | -- | -- | -- | -- |
| 69.04 | 0.387 | 6.65 | -1.32 | -- | 2.85 | -- | -- | 0.474 | -- | 9.484 | 1860 | -- | -- |
| 105.85 | 0.479 | 6.6 | -- | 0.379 | 2.29 | -- | -- | 0.721 | 16.8 | 14.84 | 1383 | -- | -- |
| 206.85 | 0.672 | 6.53 | -0.392 | -- | -- | -- | -- | 1 | -- | -- | -- | -- | -- |
| 207.33 | 0.674 | 6.53 | -- | 0.262 | -- | -- | -- | 1.05 | 18.2 | -- | -- | -- | -- |
| 108.58 | 0.485 | 6.6 | -- | -- | 2.29 | -- | -- | 0.706 | -- | 13.91 | 1791 | -- | -- |
| 210.9 | 0.678 | 6.52 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 29 | 68.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 57 | 68.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 70 | 68.61 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 124 | 68.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 187 | 69.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 197 | 69.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 200 | 69.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 22 |
| 225 | 69.29 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 235 | 69.32 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 243 | 69.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 289 | 69.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 304 | 69.63 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 314 | 69.66 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 322 | 69.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 323 | 69.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 347 | 69.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 358 | 69.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 401 | 69.96 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 414 | 69.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 433 | 70.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 660 | 70.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 904 | 71.55 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 907 | 71.56 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |