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Os01g0801600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
64.34 | 0.377 | 7.78 | -1.88 | 1.79 | -0.354 | -0.068 | 1.44 | -0.307 | 6.2 | 24.1 | 322 | -- | -- |
66.04 | 0.381 | 7.75 | -1.67 | 1.77 | -0.649 | 0.311 | -- | -0.246 | 6.06 | 22.03 | 354 | -- | -- |
64.33 | 0.374 | 7.78 | -1.88 | 1.79 | -0.36 | -- | 1.43 | -0.309 | 6.19 | 24 | 330 | -- | -- |
65.46 | 0.377 | 7.75 | -1.72 | 1.8 | -0.827 | -- | -- | -0.257 | 6.23 | 21.12 | 383 | -- | -- |
225.17 | 0.699 | 7.8 | -1.73 | -- | -0.493 | -- | 1.56 | -0.215 | -- | 19.11 | 1417 | -- | -- |
70.38 | 0.393 | 7.73 | -1.55 | 1.76 | -- | 0.265 | -- | -0.178 | 6.23 | -- | -- | -- | -- |
70.56 | 0.393 | 7.73 | -1.55 | 1.76 | -- | -- | -- | -0.179 | 6.23 | -- | -- | -- | -- |
226.12 | 0.7 | 7.79 | -1.73 | -- | -0.768 | -- | -- | -0.215 | -- | 18.66 | 2788 | -- | -- |
129.53 | 0.53 | 7.68 | -- | 1.59 | 0.56 | -- | -- | 0.0793 | 6.54 | 31.14 | 208 | -- | -- |
230.63 | 0.71 | 7.77 | -1.5 | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
133.91 | 0.541 | 7.7 | -- | 1.73 | -- | -- | -- | -0.00629 | 6.28 | -- | -- | -- | -- |
229.09 | 0.705 | 7.68 | -- | -- | 1.94 | -- | -- | 0.251 | -- | 50.36 | 372 | -- | -- |
290.17 | 0.795 | 7.73 | -- | -- | -- | -- | -- | 0.0262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 58.52 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
2 | 58.53 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
6 | 59.38 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
7 | 59.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
21 | 60.28 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 3 |
33 | 60.74 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
35 | 60.84 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 3 |
36 | 60.84 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
41 | 60.91 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 9 |
42 | 60.92 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 19 |
43 | 60.94 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 3 |
48 | 61.03 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 5 |
49 | 61.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 13 |
50 | 61.04 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 3 |
74 | 61.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 13 |
77 | 61.36 | humidity | 90.0 | 30 | < th | dose independent | rect. | 4 | 5 |
88 | 61.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
95 | 61.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 6 |
98 | 61.55 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
114 | 61.72 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 14 |
116 | 61.73 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 1 |
127 | 61.87 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 16 |
134 | 61.91 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 10 |
138 | 61.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 11 |
142 | 62.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 3 |
145 | 62.03 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 21 |
147 | 62.05 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
159 | 62.07 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 12 |
168 | 62.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 21 |
171 | 62.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 21 |
172 | 62.14 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 3 |
180 | 62.18 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 19 |
183 | 62.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
186 | 62.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
187 | 62.21 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
188 | 62.21 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 14 |
190 | 62.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
212 | 62.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 3 |
215 | 62.26 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
216 | 62.27 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
217 | 62.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 19 |
221 | 62.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 3 |
223 | 62.29 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 3 |
224 | 62.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 3 |
226 | 62.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 3 |
227 | 62.29 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 3 |
228 | 62.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 3 |
229 | 62.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 21 |
230 | 62.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 3 |
231 | 62.30 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 3 |
251 | 62.38 | radiation | 40.0 | 90 | < th | dose independent | rect. | 19 | 14 |
266 | 62.45 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 10 |
267 | 62.45 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 10 |
269 | 62.45 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 14 |
271 | 62.45 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 14 |
291 | 62.50 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
292 | 62.50 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 14 |
293 | 62.50 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 20 |
303 | 62.55 | temperature | 25.0 | 10 | > th | dose independent | sin | 8 | NA |
305 | 62.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
314 | 62.59 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 3 |
321 | 62.62 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
323 | 62.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 11 |
324 | 62.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 11 |
346 | 62.68 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 10 |
350 | 62.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 19 |
360 | 62.73 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
389 | 62.81 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 14 |
393 | 62.82 | radiation | 40.0 | 720 | < th | dose independent | rect. | 13 | 18 |
405 | 62.84 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 21 |
409 | 62.86 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 6 |
411 | 62.88 | wind | 7.0 | 720 | < th | dose independent | rect. | 7 | 4 |
415 | 62.89 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 1 |
416 | 62.89 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
421 | 62.92 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 5 |
432 | 62.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
434 | 62.95 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 21 |
435 | 62.96 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
438 | 62.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 5 |
439 | 62.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 5 |
440 | 62.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 5 |
443 | 62.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 5 |
444 | 62.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 5 |
449 | 62.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 5 |
453 | 62.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
458 | 62.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 5 |
460 | 62.98 | temperature | 25.0 | 30 | < th | dose independent | sin | 7 | NA |
463 | 62.98 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
466 | 62.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 21 |
469 | 63.00 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 10 |
470 | 63.00 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 10 |
474 | 63.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 11 |
477 | 63.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 11 |
488 | 63.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 3 |
489 | 63.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 5 |
490 | 63.05 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 19 |
493 | 63.06 | radiation | 1.0 | 90 | > th | dose independent | sin | 9 | NA |
495 | 63.06 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 23 |
499 | 63.07 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 11 |
503 | 63.08 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
506 | 63.09 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 1 |
508 | 63.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 21 |
519 | 63.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
520 | 63.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 8 |
522 | 63.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
523 | 63.12 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
533 | 63.14 | radiation | 10.0 | 720 | > th | dose independent | rect. | 8 | 2 |
538 | 63.14 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
542 | 63.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 21 |
550 | 63.17 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 21 |
557 | 63.19 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 1 |
560 | 63.20 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 12 |
563 | 63.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 21 |
568 | 63.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 21 |
574 | 63.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 12 |
575 | 63.22 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 19 |
579 | 63.23 | radiation | 10.0 | 30 | > th | dose independent | sin | 11 | NA |
593 | 63.26 | radiation | 1.0 | 90 | < th | dose independent | sin | 9 | NA |
602 | 63.27 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
608 | 63.28 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
610 | 63.28 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
623 | 63.29 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 23 |
631 | 63.30 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
633 | 63.30 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 19 |
637 | 63.31 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 21 |
643 | 63.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 3 |
644 | 63.33 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 10 |
647 | 63.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 8 |
652 | 63.34 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 21 |
669 | 63.38 | temperature | 25.0 | 30 | < th | dose independent | rect. | 23 | 13 |
679 | 63.40 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
681 | 63.40 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
682 | 63.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 3 |
686 | 63.42 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
691 | 63.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
695 | 63.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
700 | 63.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
701 | 63.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
704 | 63.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
716 | 63.44 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 1 |
725 | 63.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 11 |
726 | 63.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 19 |
749 | 63.47 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 8 |
758 | 63.48 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 13 |
762 | 63.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 3 |
765 | 63.49 | radiation | 1.0 | 90 | < th | dose dependent | sin | 8 | NA |
766 | 63.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 3 |
775 | 63.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
777 | 63.50 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
778 | 63.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
784 | 63.50 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
785 | 63.50 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
788 | 63.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
793 | 63.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
795 | 63.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
797 | 63.51 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 19 | 12 |
806 | 63.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 3 |
807 | 63.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 3 |
810 | 63.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 3 |
811 | 63.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 3 |
814 | 63.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 14 |
817 | 63.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 21 |
819 | 63.52 | radiation | 10.0 | 30 | < th | dose dependent | sin | 10 | NA |
820 | 63.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 14 |
825 | 63.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 23 |
826 | 63.53 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
828 | 63.53 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 18 | 14 |
836 | 63.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
848 | 63.55 | wind | 1.0 | 720 | > th | dose independent | rect. | 16 | 3 |
849 | 63.55 | wind | 9.0 | 720 | < th | dose independent | rect. | 16 | 3 |
872 | 63.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 14 |
877 | 63.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 19 |
884 | 63.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 19 |
898 | 63.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 19 |
899 | 63.60 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
905 | 63.61 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
912 | 63.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
930 | 63.64 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 20 |
931 | 63.64 | temperature | 15.0 | 10 | > th | dose dependent | sin | 7 | NA |
938 | 63.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 3 |
944 | 63.65 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
951 | 63.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 3 |
952 | 63.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 3 |
953 | 63.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 3 |
956 | 63.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 3 |
957 | 63.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
962 | 63.66 | radiation | 40.0 | 720 | < th | dose independent | rect. | 11 | 5 |
968 | 63.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
975 | 63.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 3 |
976 | 63.67 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 17 |
978 | 63.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 23 |
981 | 63.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 3 |
983 | 63.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 23 |