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Os01g0801600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.73 (0.0209) R2 : 0.757
β1 : -1.55 (0.0766) R2dD : 0.227 R2D : 0.199
β2 : 1.76 (0.0546) R2dC : 0.555 R2C : 0.536
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.179 (0.0447) R2dN8 : 0.0115 R2N8 : -0.0141
σ : 0.393
deviance : 70.56
__
_____
C
peak time of C : 6.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.34 0.377 7.78 -1.88 1.79 -0.354 -0.068 1.44 -0.307 6.2 24.1 322 -- --
66.04 0.381 7.75 -1.67 1.77 -0.649 0.311 -- -0.246 6.06 22.03 354 -- --
64.33 0.374 7.78 -1.88 1.79 -0.36 -- 1.43 -0.309 6.19 24 330 -- --
65.46 0.377 7.75 -1.72 1.8 -0.827 -- -- -0.257 6.23 21.12 383 -- --
225.17 0.699 7.8 -1.73 -- -0.493 -- 1.56 -0.215 -- 19.11 1417 -- --
70.38 0.393 7.73 -1.55 1.76 -- 0.265 -- -0.178 6.23 -- -- -- --
70.56 0.393 7.73 -1.55 1.76 -- -- -- -0.179 6.23 -- -- -- --
226.12 0.7 7.79 -1.73 -- -0.768 -- -- -0.215 -- 18.66 2788 -- --
129.53 0.53 7.68 -- 1.59 0.56 -- -- 0.0793 6.54 31.14 208 -- --
230.63 0.71 7.77 -1.5 -- -- -- -- -0.141 -- -- -- -- --
133.91 0.541 7.7 -- 1.73 -- -- -- -0.00629 6.28 -- -- -- --
229.09 0.705 7.68 -- -- 1.94 -- -- 0.251 -- 50.36 372 -- --
290.17 0.795 7.73 -- -- -- -- -- 0.0262 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.52 atmosphere 1005.0 30 > th dose dependent rect. 4 5
2 58.53 atmosphere 1005.0 10 > th dose dependent rect. 6 3
6 59.38 atmosphere 1005.0 270 > th dose dependent rect. 4 2
7 59.40 temperature 20.0 270 > th dose independent rect. 3 19
21 60.28 atmosphere 1005.0 30 > th dose independent rect. 6 3
33 60.74 temperature 20.0 270 > th dose dependent rect. 4 3
35 60.84 humidity 90.0 30 < th dose independent rect. 6 3
36 60.84 temperature 20.0 90 > th dose dependent rect. 4 5
41 60.91 temperature 25.0 10 > th dose independent rect. 1 9
42 60.92 temperature 20.0 30 > th dose independent rect. 6 19
43 60.94 atmosphere 1005.0 270 > th dose independent rect. 4 3
48 61.03 temperature 25.0 30 > th dose independent rect. 4 5
49 61.03 temperature 10.0 90 > th dose dependent rect. 20 13
50 61.04 temperature 25.0 10 > th dose independent rect. 6 3
74 61.34 temperature 10.0 10 > th dose dependent rect. 20 13
77 61.36 humidity 90.0 30 < th dose independent rect. 4 5
88 61.49 temperature 10.0 720 > th dose dependent rect. 19 12
95 61.54 temperature 20.0 270 > th dose independent rect. 3 6
98 61.55 temperature 15.0 30 > th dose dependent rect. 6 3
114 61.72 temperature 25.0 10 > th dose independent rect. 20 14
116 61.73 humidity 80.0 720 < th dose independent rect. 9 1
127 61.87 temperature 20.0 30 > th dose independent rect. 6 16
134 61.91 wind 9.0 90 < th dose independent rect. 9 10
138 61.95 wind 9.0 270 < th dose independent rect. 7 11
142 62.00 temperature 20.0 270 > th dose independent rect. 4 3
145 62.03 wind 9.0 30 < th dose independent rect. 9 21
147 62.05 radiation 1.0 90 > th dose independent rect. 5 4
159 62.07 temperature 15.0 720 > th dose independent rect. 19 12
168 62.13 precipitation 0.1 30 < th dose independent rect. 9 21
171 62.13 precipitation 0.1 30 < th dose dependent rect. 9 21
172 62.14 wind 5.0 30 < th dose independent rect. 6 3
180 62.18 radiation 20.0 10 < th dose independent rect. 6 19
183 62.21 temperature 10.0 1440 > th dose independent rect. 7 3
186 62.21 atmosphere 995.0 1440 > th dose independent rect. 7 3
187 62.21 atmosphere 1015.0 1440 < th dose independent rect. 7 3
188 62.21 temperature 15.0 90 > th dose independent rect. 19 14
190 62.21 temperature 10.0 1440 > th dose independent rect. 10 21
212 62.25 wind 9.0 30 < th dose dependent rect. 6 3
215 62.26 radiation 20.0 270 < th dose dependent rect. 3 20
216 62.27 atmosphere 1005.0 90 > th dose dependent rect. 24 9
217 62.27 radiation 40.0 270 < th dose dependent rect. 3 19
221 62.29 temperature 10.0 30 > th dose independent rect. 6 3
223 62.29 temperature 30.0 30 < th dose independent rect. 6 3
224 62.29 humidity 50.0 30 > th dose independent rect. 6 3
226 62.29 atmosphere 995.0 30 > th dose independent rect. 6 3
227 62.29 atmosphere 1015.0 30 < th dose independent rect. 6 3
228 62.29 precipitation 0.1 30 < th dose independent rect. 6 3
229 62.29 temperature 10.0 30 > th dose independent rect. 9 21
230 62.29 precipitation 0.1 30 < th dose dependent rect. 6 3
231 62.30 radiation 40.0 30 < th dose independent rect. 6 3
251 62.38 radiation 40.0 90 < th dose independent rect. 19 14
266 62.45 temperature 10.0 90 > th dose independent rect. 9 10
267 62.45 atmosphere 1015.0 90 < th dose independent rect. 9 10
269 62.45 humidity 50.0 90 > th dose independent rect. 19 14
271 62.45 atmosphere 995.0 90 > th dose independent rect. 19 14
291 62.50 wind 9.0 1440 < th dose independent rect. 23 8
292 62.50 wind 9.0 90 < th dose independent rect. 19 14
293 62.50 radiation 10.0 270 < th dose independent rect. 3 20
303 62.55 temperature 25.0 10 > th dose independent sin 8 NA
305 62.55 temperature 30.0 270 < th dose dependent rect. 22 5
314 62.59 wind 1.0 30 > th dose independent rect. 6 3
321 62.62 temperature 15.0 4320 > th dose independent rect. 7 1
323 62.62 temperature 10.0 270 > th dose independent rect. 7 11
324 62.62 atmosphere 1015.0 270 < th dose independent rect. 7 11
346 62.68 wind 1.0 90 > th dose independent rect. 9 10
350 62.69 atmosphere 1015.0 270 < th dose independent rect. 3 19
360 62.73 humidity 50.0 14400 > th dose dependent rect. 2 4
389 62.81 temperature 30.0 90 < th dose independent rect. 19 14
393 62.82 radiation 40.0 720 < th dose independent rect. 13 18
405 62.84 atmosphere 995.0 30 > th dose independent rect. 9 21
409 62.86 temperature 15.0 720 > th dose independent rect. 10 6
411 62.88 wind 7.0 720 < th dose independent rect. 7 4
415 62.89 wind 1.0 90 > th dose independent rect. 6 1
416 62.89 wind 3.0 30 < th dose dependent rect. 6 1
421 62.92 wind 7.0 270 < th dose independent rect. 22 5
432 62.95 humidity 50.0 1440 > th dose independent rect. 7 3
434 62.95 atmosphere 995.0 30 > th dose dependent rect. 9 21
435 62.96 radiation 40.0 1440 < th dose independent rect. 7 1
438 62.97 temperature 10.0 270 > th dose independent rect. 22 5
439 62.97 temperature 30.0 270 < th dose independent rect. 22 5
440 62.97 humidity 50.0 270 > th dose independent rect. 22 5
443 62.97 atmosphere 995.0 270 > th dose independent rect. 22 5
444 62.97 radiation 1.0 270 < th dose independent rect. 22 5
449 62.97 precipitation 0.1 270 < th dose independent rect. 22 5
453 62.97 radiation 1.0 270 < th dose dependent rect. 22 5
458 62.97 precipitation 0.1 270 < th dose dependent rect. 22 5
460 62.98 temperature 25.0 30 < th dose independent sin 7 NA
463 62.98 radiation 1.0 30 > th dose dependent rect. 6 1
466 62.99 radiation 1.0 90 < th dose independent rect. 22 21
469 63.00 precipitation 0.1 90 < th dose independent rect. 9 10
470 63.00 precipitation 0.1 90 < th dose dependent rect. 9 10
474 63.02 precipitation 0.1 270 < th dose independent rect. 7 11
477 63.02 precipitation 0.1 270 < th dose dependent rect. 7 11
488 63.05 radiation 10.0 270 < th dose independent rect. 4 3
489 63.05 radiation 10.0 270 < th dose independent rect. 4 5
490 63.05 radiation 40.0 270 < th dose independent rect. 3 19
493 63.06 radiation 1.0 90 > th dose independent sin 9 NA
495 63.06 wind 9.0 90 < th dose independent rect. 7 23
499 63.07 radiation 40.0 270 < th dose independent rect. 12 11
503 63.08 humidity 50.0 270 > th dose dependent rect. 22 5
506 63.09 humidity 90.0 90 < th dose independent rect. 6 1
508 63.09 wind 9.0 270 < th dose independent rect. 7 21
519 63.11 radiation 40.0 10 < th dose dependent rect. 6 3
520 63.12 radiation 1.0 90 < th dose independent rect. 23 8
522 63.12 temperature 30.0 30 < th dose dependent rect. 6 1
523 63.12 humidity 80.0 30 > th dose dependent rect. 6 1
533 63.14 radiation 10.0 720 > th dose independent rect. 8 2
538 63.14 radiation 30.0 270 < th dose dependent rect. 4 5
542 63.16 radiation 1.0 90 < th dose dependent rect. 22 21
550 63.17 temperature 10.0 30 > th dose dependent rect. 4 21
557 63.19 radiation 1.0 90 > th dose independent rect. 6 1
560 63.20 radiation 1.0 90 < th dose independent rect. 23 12
563 63.20 precipitation 0.1 270 < th dose independent rect. 7 21
568 63.20 precipitation 0.1 270 < th dose dependent rect. 7 21
574 63.22 radiation 40.0 270 < th dose independent rect. 3 12
575 63.22 humidity 70.0 270 > th dose independent rect. 3 19
579 63.23 radiation 10.0 30 > th dose independent sin 11 NA
593 63.26 radiation 1.0 90 < th dose independent sin 9 NA
602 63.27 wind 3.0 30 < th dose independent rect. 6 1
608 63.28 wind 9.0 270 < th dose dependent rect. 22 5
610 63.28 radiation 40.0 270 < th dose dependent rect. 3 12
623 63.29 atmosphere 1000.0 30 > th dose independent rect. 7 23
631 63.30 radiation 1.0 90 < th dose dependent rect. 23 12
633 63.30 humidity 70.0 270 > th dose dependent rect. 3 19
637 63.31 humidity 50.0 30 > th dose independent rect. 9 21
643 63.33 wind 5.0 270 < th dose independent rect. 4 3
644 63.33 radiation 20.0 10 < th dose independent rect. 6 10
647 63.33 temperature 30.0 30 < th dose dependent rect. 22 8
652 63.34 radiation 40.0 720 < th dose independent rect. 19 21
669 63.38 temperature 25.0 30 < th dose independent rect. 23 13
679 63.40 radiation 1.0 90 < th dose dependent rect. 23 8
681 63.40 radiation 40.0 720 < th dose dependent rect. 19 12
682 63.41 wind 1.0 270 > th dose independent rect. 4 3
686 63.42 wind 9.0 1440 < th dose independent rect. 7 1
691 63.42 temperature 30.0 1440 < th dose independent rect. 7 1
695 63.42 humidity 50.0 1440 > th dose independent rect. 7 1
700 63.42 atmosphere 995.0 1440 > th dose independent rect. 7 1
701 63.42 atmosphere 1015.0 1440 < th dose independent rect. 7 1
704 63.42 temperature 10.0 1440 > th dose independent rect. 8 23
716 63.44 temperature 25.0 10 > th dose independent rect. 6 1
725 63.45 wind 1.0 270 > th dose independent rect. 7 11
726 63.45 atmosphere 995.0 270 > th dose independent rect. 3 19
749 63.47 humidity 50.0 30 > th dose dependent rect. 22 8
758 63.48 temperature 25.0 270 < th dose dependent rect. 21 13
762 63.49 precipitation 0.1 270 < th dose independent rect. 4 3
765 63.49 radiation 1.0 90 < th dose dependent sin 8 NA
766 63.49 precipitation 0.1 270 < th dose dependent rect. 4 3
775 63.50 temperature 10.0 30 > th dose independent rect. 6 1
777 63.50 temperature 30.0 30 < th dose independent rect. 6 1
778 63.50 humidity 50.0 30 > th dose independent rect. 6 1
784 63.50 atmosphere 1015.0 30 < th dose independent rect. 6 1
785 63.50 radiation 20.0 30 < th dose independent rect. 6 1
788 63.50 precipitation 0.1 30 < th dose independent rect. 6 1
793 63.50 temperature 10.0 30 > th dose independent rect. 7 23
795 63.50 precipitation 0.1 30 < th dose dependent rect. 6 1
797 63.51 atmosphere 1015.0 720 < th dose independent rect. 19 12
806 63.52 temperature 30.0 270 < th dose independent rect. 4 3
807 63.52 humidity 50.0 270 > th dose independent rect. 4 3
810 63.52 atmosphere 995.0 270 > th dose independent rect. 4 3
811 63.52 atmosphere 1015.0 270 < th dose independent rect. 4 3
814 63.52 precipitation 0.1 90 < th dose independent rect. 19 14
817 63.52 temperature 10.0 270 > th dose independent rect. 7 21
819 63.52 radiation 10.0 30 < th dose dependent sin 10 NA
820 63.52 precipitation 0.1 90 < th dose dependent rect. 19 14
825 63.53 humidity 50.0 30 > th dose independent rect. 7 23
826 63.53 humidity 50.0 30 > th dose dependent rect. 6 3
828 63.53 radiation 40.0 270 < th dose dependent rect. 18 14
836 63.54 temperature 10.0 10 > th dose dependent rect. 6 19
848 63.55 wind 1.0 720 > th dose independent rect. 16 3
849 63.55 wind 9.0 720 < th dose independent rect. 16 3
872 63.57 atmosphere 1015.0 90 < th dose independent rect. 19 14
877 63.58 precipitation 0.1 270 < th dose independent rect. 3 19
884 63.58 precipitation 0.1 270 < th dose dependent rect. 3 19
898 63.60 wind 9.0 270 < th dose independent rect. 3 19
899 63.60 atmosphere 995.0 90 > th dose dependent rect. 9 19
905 63.61 radiation 20.0 10 < th dose dependent rect. 6 1
912 63.62 humidity 50.0 270 > th dose dependent rect. 23 3
930 63.64 wind 9.0 720 < th dose independent rect. 23 20
931 63.64 temperature 15.0 10 > th dose dependent sin 7 NA
938 63.65 wind 7.0 270 < th dose independent rect. 23 3
944 63.65 radiation 40.0 270 < th dose dependent rect. 4 3
951 63.66 temperature 10.0 270 > th dose independent rect. 23 3
952 63.66 temperature 30.0 270 < th dose independent rect. 23 3
953 63.66 humidity 50.0 270 > th dose independent rect. 23 3
956 63.66 atmosphere 995.0 270 > th dose independent rect. 23 3
957 63.66 radiation 1.0 270 < th dose independent rect. 23 3
962 63.66 radiation 40.0 720 < th dose independent rect. 11 5
968 63.66 radiation 1.0 270 < th dose dependent rect. 23 3
975 63.67 precipitation 0.1 270 < th dose independent rect. 23 3
976 63.67 radiation 1.0 90 < th dose independent rect. 23 17
978 63.67 precipitation 0.1 30 < th dose independent rect. 7 23
981 63.67 precipitation 0.1 270 < th dose dependent rect. 23 3
983 63.67 precipitation 0.1 30 < th dose dependent rect. 7 23