Os01g0784800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Flavodoxin/nitric oxide synthase domain containing protein.
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Os01g0784800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Flavodoxin/nitric oxide synthase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.82 | 0.257 | 14.4 | 0.136 | 0.704 | 0.72 | 0.649 | -3.29 | 0.446 | 0.443 | 20.3 | 2519 | -- | -- |
| 37 | 0.283 | 14.2 | 1.06 | 0.739 | 0.656 | 0.455 | -- | 0.695 | 0.113 | 14.71 | 2860 | -- | -- |
| 31.26 | 0.26 | 14.4 | 0.0919 | 0.741 | 0.689 | -- | -3.35 | 0.449 | 0.464 | 21.1 | 3048 | -- | -- |
| 37.65 | 0.286 | 14.2 | 1.02 | 0.729 | 0.715 | -- | -- | 0.693 | 0.317 | 14.36 | 2825 | -- | -- |
| 60.7 | 0.363 | 14.4 | -0.0245 | -- | 0.944 | -- | -3.71 | 0.423 | -- | 21.87 | 2436 | -- | -- |
| 47.19 | 0.322 | 14.2 | 1.33 | 0.784 | -- | 0.453 | -- | 0.844 | 0.436 | -- | -- | -- | -- |
| 48.08 | 0.325 | 14.2 | 1.31 | 0.783 | -- | -- | -- | 0.842 | 0.462 | -- | -- | -- | -- |
| 61.55 | 0.365 | 14.2 | 0.992 | -- | 1.24 | -- | -- | 0.651 | -- | 13.19 | 959 | -- | -- |
| 45.95 | 0.316 | 14.3 | -- | 0.756 | 1.15 | -- | -- | 0.368 | 0.455 | 10.7 | 41547 | -- | -- |
| 86.53 | 0.435 | 14.2 | 1.34 | -- | -- | -- | -- | 0.855 | -- | -- | -- | -- | -- |
| 93.61 | 0.453 | 14.2 | -- | 0.802 | -- | -- | -- | 0.695 | 0.545 | -- | -- | -- | -- |
| 81.72 | 0.421 | 14.3 | -- | -- | 1.16 | -- | -- | 0.358 | -- | 9.465 | 42734 | -- | -- |
| 133.99 | 0.54 | 14.2 | -- | -- | -- | -- | -- | 0.706 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 3 | 29.14 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 29.26 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 18 | 29.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 25 | 29.35 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 35 | 29.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 43 | 29.42 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 69 | 29.53 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 74 | 29.54 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 75 | 29.54 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 76 | 29.54 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 83 | 29.57 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 86 | 29.57 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 90 | 29.58 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 91 | 29.58 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 100 | 29.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 112 | 29.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 118 | 29.61 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 129 | 29.62 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 131 | 29.63 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 168 | 29.67 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 182 | 29.67 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 194 | 29.69 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 208 | 29.71 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 219 | 29.73 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 234 | 29.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 18 |
| 237 | 29.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 259 | 29.76 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 8 |
| 270 | 29.77 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 284 | 29.78 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 291 | 29.79 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 304 | 29.80 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 397 | 29.88 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 424 | 29.90 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 471 | 29.94 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 550 | 30.00 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 577 | 30.02 | humidity | 60.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 578 | 30.02 | humidity | 60.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 580 | 30.02 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 586 | 30.03 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 597 | 30.04 | temperature | 25.0 | 4320 | > th | dose independent | sin | 23 | NA |
| 598 | 30.04 | temperature | 25.0 | 4320 | < th | dose independent | sin | 23 | NA |
| 619 | 30.05 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 622 | 30.05 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 646 | 30.06 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 648 | 30.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 664 | 30.07 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 6 |
| 676 | 30.08 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 684 | 30.08 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 721 | 30.09 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 725 | 30.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 749 | 30.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 758 | 30.11 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 772 | 30.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 801 | 30.13 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 866 | 30.16 | radiation | 20.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 871 | 30.16 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 873 | 30.16 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 888 | 30.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 889 | 30.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 896 | 30.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 905 | 30.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 907 | 30.18 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 909 | 30.18 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 915 | 30.18 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 916 | 30.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 950 | 30.20 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 15 | 3 |
| 965 | 30.20 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 968 | 30.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 986 | 30.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 987 | 30.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |