Os01g0784600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0784600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.19 | 0.294 | 9.48 | 0.0112 | 0.727 | -1.01 | -0.434 | -2.2 | -0.0527 | 19.4 | 28.37 | 351 | -- | -- |
| 43.82 | 0.308 | 9.51 | -0.298 | 0.757 | -0.956 | 0.0112 | -- | -0.0604 | 19.8 | 32.1 | 251 | -- | -- |
| 39.63 | 0.293 | 9.48 | 0.00177 | 0.732 | -1 | -- | -2.03 | -0.0625 | 19.5 | 28.02 | 350 | -- | -- |
| 43.63 | 0.308 | 9.51 | -0.355 | 0.73 | -1.02 | -- | -- | -0.0785 | 19.7 | 32.6 | 249 | -- | -- |
| 59.67 | 0.36 | 9.48 | -0.122 | -- | -1.56 | -- | -2.29 | -0.124 | -- | 31.57 | 457 | -- | -- |
| 56.67 | 0.353 | 9.49 | -0.134 | 0.968 | -- | 0.0615 | -- | 0.0522 | 18.9 | -- | -- | -- | -- |
| 56.68 | 0.353 | 9.49 | -0.136 | 0.968 | -- | -- | -- | 0.0524 | 18.9 | -- | -- | -- | -- |
| 63.69 | 0.372 | 9.52 | -0.517 | -- | -1.67 | -- | -- | -0.203 | -- | 53.95 | 458 | -- | -- |
| 46.92 | 0.319 | 9.51 | -- | 0.776 | -0.901 | -- | -- | -0.0508 | 19.6 | 32.61 | 248 | -- | -- |
| 105.85 | 0.481 | 9.46 | -0.156 | -- | -- | -- | -- | 0.034 | -- | -- | -- | -- | -- |
| 57.16 | 0.354 | 9.48 | -- | 0.97 | -- | -- | -- | 0.0675 | 18.9 | -- | -- | -- | -- |
| 70.17 | 0.39 | 9.5 | -- | -- | -1.49 | -- | -- | -0.124 | -- | 63.99 | 434 | -- | -- |
| 106.49 | 0.482 | 9.46 | -- | -- | -- | -- | -- | 0.0513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 9 | 38.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 27 | 39.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 29 | 39.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 59 | 39.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 62 | 39.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 84 | 39.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 89 | 39.64 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 103 | 39.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 120 | 39.83 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 127 | 39.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 15 |
| 150 | 39.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 173 | 40.02 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 226 | 40.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 324 | 40.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 391 | 40.51 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 399 | 40.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 417 | 40.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 464 | 40.61 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 479 | 40.63 | temperature | 25 | 720 | < th | dose dependent | sin | 23 | NA |
| 491 | 40.64 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 21 |
| 914 | 41.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 941 | 41.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 952 | 41.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 989 | 41.14 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |