BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0784600 Os01g0784600|AK067527
         (346 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15730.1  | chr2:6849797-6851881 FORWARD LENGTH=345            359   1e-99
AT4G34420.1  | chr4:16458430-16460526 FORWARD LENGTH=343          341   4e-94
AT3G50620.1  | chr3:18784993-18786747 REVERSE LENGTH=341          318   2e-87

>AT2G15730.1 | chr2:6849797-6851881 FORWARD LENGTH=345
          Length = 344

 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/276 (61%), Positives = 216/276 (78%), Gaps = 6/276 (2%)

Query: 32  KSTRRYPLLSWTTILALIALVGVYIFSVSLKQNGML--LGLKQTDMIEKEREKLCQDPSI 89
           K  ++ PL+  T +L  + +  VYI S+ LKQ G++   G    ++ E+     C +P+I
Sbjct: 16  KLPKKSPLVLRTVVLLFVMVCTVYICSICLKQIGVVPSAGFLNVEVFERP----CPEPNI 71

Query: 90  PVTEIPYVHYPTPDTYSRKECACTPVRFFAILSMQRSGSGWIETLLNSHENISSNGEIFS 149
              +IPYVHYP P TYSR+EC+C PVR+FAILSMQRSGSGW ETLLN+H NISSNGEIFS
Sbjct: 72  QPWDIPYVHYPKPKTYSREECSCNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFS 131

Query: 150 IKERRSNITSITKTLDKLYNLDWLSSAAKNECTAAVGLKWMLNQGLVQHHEEVVEYFNRR 209
           +K+RR+N+++I +TLDK+YNLDWLSSA+KNECT+AVGLKWMLNQGL+++HEE+VEYF  R
Sbjct: 132 VKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGLKWMLNQGLMKNHEEIVEYFKTR 191

Query: 210 GVSAIFLLRRNTLQRYVSVLANAHDSKAKQINGTHKSHVHSEREAQILAQFKPEIDTKKL 269
           GVSAIFL RRN L+R +SVLAN++D  AK +NGTHKSHVHS +EA+ILA++KP I+T  L
Sbjct: 192 GVSAIFLFRRNLLRRMISVLANSYDRDAKPLNGTHKSHVHSPKEAEILARYKPLINTSLL 251

Query: 270 IADLKKSDKLAADALLYFKKTRHIILYYEDVVSNDT 305
           I DLK+  ++ + AL YF  TRHI LYYEDVV N T
Sbjct: 252 IPDLKQVQEMTSKALAYFNTTRHIFLYYEDVVKNRT 287



>AT4G34420.1 | chr4:16458430-16460526 FORWARD LENGTH=343
          Length = 342

 Score =  341 bits (874), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 158/263 (60%), Positives = 204/263 (77%), Gaps = 6/263 (2%)

Query: 45  ILALIALVGVYIFSVSLKQNGML--LGLKQTDMIEKEREKLCQDPSIPVTEIPYVHYPTP 102
           +L  + +  VYI S+ LKQ G+    G    ++ E+     C +P+I   +IP+VHYP P
Sbjct: 29  VLLFVMVCAVYICSICLKQIGVSPNYGFLNVEVFERP----CPEPNIEPWDIPFVHYPKP 84

Query: 103 DTYSRKECACTPVRFFAILSMQRSGSGWIETLLNSHENISSNGEIFSIKERRSNITSITK 162
            TY+R EC+C PVR+FAILSMQRSGSGW ETLLN+H NISSNGEIFS+K+RR+N+++I +
Sbjct: 85  KTYNRDECSCHPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFE 144

Query: 163 TLDKLYNLDWLSSAAKNECTAAVGLKWMLNQGLVQHHEEVVEYFNRRGVSAIFLLRRNTL 222
           TLDK+YNLDWLSSA+KNECT+AVG KWMLNQGL++HHEE+VEYF  RGVSAIFL R+N L
Sbjct: 145 TLDKVYNLDWLSSASKNECTSAVGFKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRKNLL 204

Query: 223 QRYVSVLANAHDSKAKQINGTHKSHVHSEREAQILAQFKPEIDTKKLIADLKKSDKLAAD 282
           +R +SVLAN++D  AK +NGTHKSH HS +EA+ILA +KP I+T  LI +L++  ++   
Sbjct: 205 RRMISVLANSYDRDAKLLNGTHKSHTHSAKEAEILAGYKPMINTTLLINELRQIQEMTLK 264

Query: 283 ALLYFKKTRHIILYYEDVVSNDT 305
           AL YF  TRHI++YYEDVV N T
Sbjct: 265 ALTYFNTTRHILVYYEDVVKNLT 287



>AT3G50620.1 | chr3:18784993-18786747 REVERSE LENGTH=341
          Length = 340

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/285 (53%), Positives = 203/285 (71%), Gaps = 12/285 (4%)

Query: 24  KDTVNPSAKSTRRYPLLSWTTILALIALVGVYIFSVSLKQNGMLLGLKQTDMIEKEREKL 83
           KD+     K  ++ PL     +L    + G+YI +V LKQ            +  +  +L
Sbjct: 10  KDSAAIVIKQPKKSPLFLRMIVLVFAMVCGLYICAVCLKQ---------LSNVSFQTSQL 60

Query: 84  CQDPSIPVTEIPYV---HYPTPDTYSRKECACTPVRFFAILSMQRSGSGWIETLLNSHEN 140
            Q   I    + +V   HYP P T++R EC   PVR+FAILSMQRSGSGW ETLLNSH N
Sbjct: 61  VQTSPIDSHSLRFVTRIHYPKPQTFNRAECGHNPVRYFAILSMQRSGSGWFETLLNSHNN 120

Query: 141 ISSNGEIFSIKERRSNITSITKTLDKLYNLDWLSSAAKNECTAAVGLKWMLNQGLVQHHE 200
           +SSNGEIFS+ +RR NI+SI +TLD++YNLDW +SA+KNEC+AA+G KWMLNQGL+++H+
Sbjct: 121 VSSNGEIFSVLDRRKNISSIIQTLDRVYNLDWFTSASKNECSAAIGFKWMLNQGLLENHK 180

Query: 201 EVVEYFNRRGVSAIFLLRRNTLQRYVSVLANAHDSKAKQINGTHKSHVHSEREAQILAQF 260
           ++VEYFNRRGVSAIFL RRN L+R VSVLAN++D  AK +NGTHKSHVHS  EA  L+++
Sbjct: 181 DIVEYFNRRGVSAIFLFRRNPLRRMVSVLANSYDRYAKLLNGTHKSHVHSPAEADALSRY 240

Query: 261 KPEIDTKKLIADLKKSDKLAADALLYFKKTRHIILYYEDVVSNDT 305
           KP I++  LI DL++++  AA AL YF  TRHI+++YED+++N T
Sbjct: 241 KPVINSTSLIHDLQETENSAAKALEYFNTTRHIVVFYEDLITNQT 285



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.132    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,606,106
Number of extensions: 261483
Number of successful extensions: 724
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 721
Number of HSP's successfully gapped: 3
Length of query: 346
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 247
Effective length of database: 8,392,385
Effective search space: 2072919095
Effective search space used: 2072919095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)