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Os01g0775100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Plus-3 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0253) R2 : 0.858
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.35 (0.0653) R2dC : 0.826 R2C : 0.784
β3 : 1.26 (0.101) R2dE : 0.0575 R2E : 0.0341
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.188 (0.0564) R2dN8 : 0.00534 R2N8 : 0.00909
σ : 0.466
deviance : 100.26
__
_____
C
peak time of C : 6.16
E
wheather : temperature
threshold : 25.1
memory length : 2752
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.03 0.433 11.8 -0.791 3.31 1.54 1.79 1.89 -0.371 6.25 23.42 1475 -- --
87.91 0.437 11.8 -0.522 3.32 1.17 1.63 -- -0.304 6.24 25 1517 -- --
92.66 0.448 11.8 -0.725 3.32 1.67 -- 1.89 -0.375 6.21 22.89 1487 -- --
95.3 0.455 11.8 -0.501 3.32 1.21 -- -- -0.305 6.22 25 1504 -- --
409.31 0.942 11.8 -0.263 -- 4.14 -- 2.28 0.00735 -- 66.19 393 -- --
106.67 0.484 11.8 -0.888 3.29 -- 1.82 -- -0.545 6.28 -- -- -- --
114.77 0.502 11.8 -0.868 3.3 -- -- -- -0.552 6.23 -- -- -- --
412.9 0.946 11.8 0.105 -- 4.21 -- -- 0.107 -- 70.47 392 -- --
100.26 0.466 11.7 -- 3.35 1.26 -- -- -0.188 6.16 25.1 2752 -- --
679.28 1.22 11.9 -0.777 -- -- -- -- -0.479 -- -- -- -- --
134.61 0.543 11.8 -- 3.29 -- -- -- -0.455 6.25 -- -- -- --
413.18 0.947 11.8 -- -- 4.17 -- -- 0.0908 -- 85.83 392 -- --
695.22 1.23 11.9 -- -- -- -- -- -0.393 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.57 temperature 10.0 270 > th dose dependent rect. 14 18
2 69.89 temperature 10.0 270 > th dose dependent rect. 13 20
29 75.69 temperature 10.0 270 > th dose dependent rect. 3 16
33 75.87 temperature 10.0 10 > th dose dependent rect. 16 18
46 76.87 temperature 30.0 270 < th dose dependent rect. 8 18
51 77.02 temperature 20.0 270 > th dose independent rect. 13 6
58 77.32 radiation 1.0 270 < th dose dependent sin 14 NA
60 77.39 temperature 20.0 270 > th dose independent rect. 14 4
63 77.40 wind 3.0 270 > th dose independent rect. 15 2
66 77.50 humidity 90.0 270 < th dose independent rect. 15 2
71 77.70 precipitation 0.1 270 < th dose independent rect. 18 20
72 77.70 precipitation 0.1 270 < th dose dependent rect. 18 20
81 77.92 temperature 10.0 270 > th dose dependent rect. 14 5
96 78.08 temperature 10.0 270 > th dose dependent rect. 13 7
99 78.15 wind 1.0 270 > th dose dependent rect. 15 2
101 78.16 temperature 10.0 270 > th dose dependent rect. 15 3
107 78.24 radiation 1.0 270 < th dose independent sin 14 NA
117 78.49 humidity 90.0 270 < th dose independent rect. 14 4
127 78.74 atmosphere 995.0 270 > th dose independent rect. 18 20
138 78.96 temperature 10.0 270 > th dose independent rect. 14 4
140 78.96 atmosphere 1010.0 270 < th dose independent rect. 14 4
142 78.96 temperature 10.0 270 > th dose independent rect. 18 20
155 79.07 radiation 40.0 270 < th dose independent rect. 14 4
168 79.12 wind 9.0 270 < th dose independent rect. 14 4
169 79.12 radiation 1.0 270 > th dose independent rect. 8 6
177 79.22 precipitation 0.1 270 < th dose independent rect. 8 6
178 79.22 precipitation 0.1 270 < th dose dependent rect. 8 6
179 79.23 temperature 20.0 270 > th dose independent rect. 13 19
197 79.37 temperature 10.0 270 > th dose independent rect. 8 6
198 79.37 atmosphere 995.0 270 > th dose independent rect. 8 6
199 79.37 atmosphere 1015.0 270 < th dose independent rect. 8 6
200 79.37 temperature 10.0 270 > th dose independent rect. 14 18
203 79.41 wind 9.0 270 < th dose independent rect. 18 20
212 79.45 wind 1.0 270 > th dose independent rect. 13 6
216 79.50 temperature 10.0 270 > th dose dependent rect. 23 21
222 79.56 temperature 10.0 270 > th dose independent rect. 13 6
224 79.56 atmosphere 1010.0 270 < th dose independent rect. 13 6
226 79.56 temperature 10.0 270 > th dose independent rect. 19 18
227 79.56 atmosphere 995.0 270 > th dose independent rect. 19 18
238 79.60 wind 9.0 270 < th dose independent rect. 14 18
243 79.66 temperature 15.0 270 > th dose independent rect. 3 15
244 79.66 temperature 10.0 270 > th dose dependent rect. 23 10
249 79.71 wind 9.0 270 < th dose independent rect. 13 6
255 79.76 precipitation 0.1 10 < th dose independent rect. 16 4
256 79.76 precipitation 0.1 10 < th dose dependent rect. 16 4
258 79.78 precipitation 0.1 270 < th dose independent rect. 14 4
259 79.78 precipitation 0.1 270 < th dose dependent rect. 14 4
261 79.79 atmosphere 995.0 10 > th dose independent rect. 20 20
263 79.81 wind 9.0 270 < th dose independent rect. 8 6
264 79.82 radiation 1.0 270 < th dose dependent rect. 18 9
287 79.98 temperature 10.0 10 > th dose dependent rect. 16 4
294 80.03 radiation 1.0 270 > th dose independent rect. 14 17
300 80.13 radiation 20.0 10 < th dose dependent rect. 13 7
301 80.17 radiation 1.0 270 < th dose independent rect. 18 9
303 80.19 radiation 40.0 10 < th dose dependent rect. 16 4
307 80.24 humidity 60.0 270 > th dose independent rect. 18 9
308 80.25 temperature 30.0 270 < th dose independent rect. 18 9
309 80.26 wind 1.0 10 > th dose independent rect. 16 4
314 80.27 radiation 1.0 270 > th dose independent rect. 15 2
315 80.27 radiation 40.0 270 < th dose independent rect. 14 17
323 80.33 temperature 10.0 10 > th dose independent rect. 16 4
325 80.33 atmosphere 1010.0 10 < th dose independent rect. 16 4
327 80.33 radiation 30.0 10 < th dose independent rect. 16 4
330 80.33 temperature 10.0 10 > th dose independent rect. 20 20
334 80.38 radiation 1.0 270 > th dose independent rect. 9 4
336 80.39 wind 9.0 270 < th dose independent rect. 3 15
358 80.52 humidity 60.0 270 > th dose independent rect. 23 10
359 80.53 wind 9.0 10 < th dose independent rect. 16 4
366 80.54 radiation 40.0 10 < th dose dependent rect. 14 6
375 80.58 atmosphere 995.0 270 > th dose independent rect. 18 9
376 80.58 temperature 30.0 270 < th dose independent rect. 19 18
388 80.65 radiation 1.0 270 > th dose independent sin 14 NA
398 80.68 wind 9.0 270 < th dose independent rect. 18 9
404 80.70 temperature 30.0 270 < th dose independent rect. 8 6
405 80.70 atmosphere 1015.0 270 < th dose dependent rect. 15 2
408 80.72 temperature 10.0 270 > th dose independent rect. 18 9
410 80.72 radiation 20.0 270 < th dose independent rect. 18 9
414 80.72 atmosphere 1015.0 270 < th dose independent rect. 3 15
429 80.77 precipitation 0.1 10 < th dose independent rect. 20 20
430 80.77 precipitation 0.1 10 < th dose dependent rect. 20 20
432 80.78 wind 9.0 10 < th dose independent rect. 20 20
453 80.84 precipitation 0.1 270 < th dose independent rect. 9 14
454 80.84 precipitation 0.1 270 < th dose dependent rect. 9 14
467 80.92 precipitation 0.1 270 < th dose independent rect. 18 9
469 80.92 precipitation 0.1 270 < th dose dependent rect. 18 9
484 81.00 temperature 10.0 270 > th dose independent rect. 23 10
486 81.00 atmosphere 995.0 270 > th dose independent rect. 23 10
487 81.00 temperature 10.0 270 > th dose independent rect. 9 14
489 81.01 wind 9.0 270 < th dose independent rect. 23 10
504 81.03 atmosphere 1015.0 270 < th dose independent rect. 14 18
529 81.08 temperature 10.0 90 > th dose independent rect. 16 17
544 81.13 humidity 50.0 10 > th dose independent rect. 16 4
562 81.19 atmosphere 995.0 270 > th dose dependent rect. 8 6
572 81.23 wind 1.0 270 > th dose independent rect. 9 4
576 81.24 temperature 10.0 1440 > th dose independent rect. 17 4
580 81.24 radiation 30.0 1440 < th dose independent rect. 17 4
586 81.24 temperature 10.0 1440 > th dose independent rect. 21 20
592 81.25 atmosphere 1015.0 270 < th dose independent rect. 23 10
595 81.26 atmosphere 995.0 270 > th dose dependent rect. 9 4
603 81.31 radiation 40.0 90 < th dose independent rect. 16 17
608 81.33 wind 9.0 90 < th dose independent rect. 16 17
628 81.43 radiation 40.0 270 < th dose independent rect. 23 10
632 81.44 atmosphere 1015.0 10 < th dose dependent rect. 16 4
647 81.53 radiation 10.0 10 < th dose independent rect. 13 7
683 81.65 radiation 1.0 270 > th dose independent rect. 14 5
714 81.74 radiation 1.0 10 > th dose independent rect. 10 6
717 81.76 atmosphere 995.0 10 > th dose independent rect. 16 4
722 81.79 precipitation 0.1 270 < th dose independent rect. 14 18
724 81.79 precipitation 0.1 270 < th dose dependent rect. 14 18
725 81.80 wind 9.0 270 < th dose independent rect. 9 14
764 81.94 atmosphere 995.0 10 > th dose independent rect. 10 6
774 82.02 radiation 20.0 10 < th dose dependent rect. 10 10
798 82.14 radiation 20.0 10 < th dose dependent rect. 7 13
806 82.18 wind 3.0 43200 < th dose dependent rect. 23 2
811 82.20 atmosphere 1015.0 90 < th dose independent rect. 16 17
866 82.33 temperature 10.0 10 > th dose independent rect. 10 6
868 82.33 atmosphere 1015.0 10 < th dose independent rect. 10 6
869 82.33 precipitation 0.1 10 < th dose independent rect. 10 6
871 82.33 temperature 10.0 10 > th dose independent rect. 16 18
872 82.33 precipitation 0.1 10 < th dose dependent rect. 10 6
896 82.45 wind 1.0 270 > th dose independent rect. 18 9
918 82.54 temperature 30.0 270 < th dose independent rect. 23 10
922 82.55 atmosphere 995.0 90 > th dose independent rect. 16 17
924 82.56 wind 9.0 10 < th dose independent rect. 16 18
926 82.58 temperature 15.0 1440 > th dose independent rect. 11 6
939 82.61 temperature 10.0 270 > th dose dependent sin 17 NA
950 82.66 temperature 10.0 43200 > th dose independent rect. 10 7
958 82.71 atmosphere 1015.0 10 < th dose independent rect. 16 18
963 82.74 wind 9.0 10 < th dose independent rect. 10 6