Os01g0761000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0761000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.85 | 0.406 | 14.9 | -2.48 | 0.695 | -1.08 | 0.763 | -0.396 | -0.758 | 10.7 | 2.24 | 1452 | -- | -- |
| 74.83 | 0.403 | 14.9 | -2.49 | 0.646 | -1.03 | 0.792 | -- | -0.755 | 10.5 | 2.518 | 1471 | -- | -- |
| 77.17 | 0.409 | 14.9 | -2.48 | 0.692 | -1.08 | -- | -0.416 | -0.767 | 10.8 | 2.276 | 1464 | -- | -- |
| 76.73 | 0.408 | 14.9 | -2.49 | 0.517 | -1.05 | -- | -- | -0.756 | 10 | 2.582 | 1548 | -- | -- |
| 85.37 | 0.43 | 14.9 | -2.46 | -- | -1.66 | -- | -0.816 | -0.792 | -- | 1.818 | 1586 | -- | -- |
| 87.82 | 0.439 | 14.8 | -2.32 | 0.734 | -- | 0.678 | -- | -0.621 | 10.6 | -- | -- | -- | -- |
| 89.63 | 0.443 | 14.8 | -2.29 | 0.729 | -- | -- | -- | -0.618 | 10.9 | -- | -- | -- | -- |
| 86.09 | 0.432 | 14.9 | -2.55 | -- | -1.62 | -- | -- | -0.805 | -- | 2.257 | 1595 | -- | -- |
| 213.46 | 0.68 | 14.7 | -- | 1.04 | -1.08 | -- | -- | -0.424 | 11.1 | 10 | 5474 | -- | -- |
| 122.58 | 0.517 | 14.8 | -2.31 | -- | -- | -- | -- | -0.623 | -- | -- | -- | -- | -- |
| 228.12 | 0.707 | 14.8 | -- | 0.749 | -- | -- | -- | -0.363 | 11.1 | -- | -- | -- | -- |
| 232.33 | 0.712 | 14.8 | -- | -- | -0.564 | -- | -- | -0.37 | -- | 10 | 5474 | -- | -- |
| 263.05 | 0.757 | 14.8 | -- | -- | -- | -- | -- | -0.367 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.86 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 14 | 72.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 15 | 72.06 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 18 | 72.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 21 | 72.09 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 26 | 72.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 59 | 72.11 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 72 | 72.14 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 107 | 72.19 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 149 | 72.27 | radiation | 1 | 1440 | < th | dose independent | sin | 18 | NA |
| 150 | 72.29 | radiation | 1 | 1440 | > th | dose independent | sin | 18 | NA |
| 154 | 72.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 156 | 72.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 160 | 72.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 163 | 72.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 246 | 72.57 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 276 | 72.65 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 365 | 73.01 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 450 | 73.43 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 462 | 73.60 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 523 | 73.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 528 | 73.80 | humidity | 60 | 720 | > th | dose dependent | sin | 15 | NA |
| 555 | 73.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 8 |
| 595 | 74.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 600 | 74.05 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 3 |
| 620 | 74.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 665 | 74.32 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 710 | 74.41 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 728 | 74.47 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 742 | 74.52 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 766 | 74.59 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 813 | 74.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 844 | 74.73 | humidity | 90 | 720 | > th | dose dependent | sin | 19 | NA |
| 888 | 74.78 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 889 | 74.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 899 | 74.82 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 6 |