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Os01g0759000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.39 (0.0307) R2 : 0.625
β1 : -1.92 (0.113) R2dD : 0.245 R2D : 0.129
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.74 (0.0824) R2dE : 0.369 R2E : 0.306
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.704 (0.0656) R2dN8 : 0.134 R2N8 : 0.0314
σ : 0.575
deviance : 152.2
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_____
C
peak time of C : --
E
wheather : temperature
threshold : -3.506
memory length : 1024
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.05
open length of G : 5.43

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
131.4 0.539 6.4 -1.83 1.72 1.91 1.29 2.04 -0.667 20.4 10.81 230 6 7.57
137.12 0.545 6.4 -1.86 1.72 1.86 0.3 -- -0.656 20.2 10.45 209 6.08 7.61
135.13 0.541 6.42 -1.83 1.75 1.92 -- 1.38 -0.68 20.3 11.02 226 5.82 7.78
137.11 0.545 6.41 -1.86 1.82 1.99 -- -- -0.67 20.5 8.146 228 5.88 7.73
171.24 0.609 6.39 -2.01 -- 1.7 -- 1.91 -0.78 -- 8.849 876 6.18 7.72
177.74 0.625 6.38 -1.77 1.49 -- 1.35 -- -0.636 16.7 -- -- -- --
182.47 0.633 6.37 -1.76 1.5 -- -- -- -0.629 16.8 -- -- -- --
152.2 0.575 6.39 -1.92 -- 1.74 -- -- -0.704 -- -3.506 1024 6.05 5.43
226.54 0.701 6.39 -- 1.79 1.66 -- -- -0.456 20 2.589 221 5.8 7.7
301.45 0.811 6.36 -1.82 -- -- -- -- -0.668 -- -- -- -- --
264.47 0.761 6.33 -- 1.53 -- -- -- -0.433 16.7 -- -- -- --
241.31 0.723 6.31 -- -- 1.81 -- -- -0.41 -- -21.01 1009 5.7 6.37
388.84 0.92 6.31 -- -- -- -- -- -0.466 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.04 temperature 10.0 270 > th dose dependent rect. 6 7
11 136.93 temperature 15.0 10 > th dose dependent rect. 8 8
22 138.95 wind 7.0 270 < th dose independent rect. 6 8
32 139.28 temperature 10.0 270 > th dose dependent rect. 19 18
35 139.66 temperature 10.0 10 > th dose dependent rect. 8 18
38 139.91 temperature 20.0 270 > th dose independent rect. 6 8
41 140.21 wind 9.0 270 < th dose dependent rect. 6 8
60 141.12 humidity 50.0 270 > th dose dependent rect. 18 8
64 141.22 precipitation 0.1 270 < th dose independent rect. 14 16
65 141.22 precipitation 0.1 270 < th dose dependent rect. 14 16
68 141.33 radiation 40.0 90 < th dose independent rect. 3 16
76 142.01 precipitation 0.1 270 < th dose independent rect. 6 8
77 142.01 precipitation 0.1 270 < th dose dependent rect. 6 8
85 142.23 atmosphere 995.0 270 > th dose independent rect. 6 8
86 142.23 atmosphere 1015.0 270 < th dose independent rect. 6 8
87 142.23 temperature 10.0 270 > th dose independent rect. 14 16
88 142.26 radiation 40.0 10 < th dose independent rect. 4 16
89 142.27 precipitation 0.1 270 < th dose independent rect. 2 15
90 142.27 precipitation 0.1 270 < th dose dependent rect. 2 15
96 142.49 wind 9.0 270 < th dose independent rect. 14 16
99 142.62 humidity 60.0 270 > th dose independent rect. 18 8
100 142.62 radiation 40.0 270 < th dose independent rect. 1 16
105 142.77 radiation 40.0 270 < th dose dependent rect. 1 16
108 142.83 atmosphere 995.0 270 > th dose independent rect. 14 16
115 142.95 temperature 30.0 270 < th dose independent rect. 18 8
118 143.04 radiation 40.0 270 < th dose independent rect. 14 16
125 143.12 radiation 40.0 10 < th dose dependent rect. 4 16
126 143.14 radiation 1.0 270 < th dose independent rect. 18 8
128 143.20 radiation 40.0 90 < th dose dependent rect. 3 16
130 143.29 radiation 20.0 270 < th dose dependent rect. 17 9
134 143.32 wind 7.0 90 < th dose independent rect. 8 7
143 143.34 temperature 10.0 270 > th dose independent rect. 18 8
145 143.34 radiation 20.0 270 < th dose independent rect. 18 8
148 143.34 temperature 10.0 270 > th dose independent rect. 2 16
149 143.34 atmosphere 1015.0 270 < th dose independent rect. 2 16
151 143.40 wind 9.0 270 < th dose independent rect. 18 8
160 143.49 temperature 20.0 90 > th dose independent rect. 8 7
168 143.62 atmosphere 995.0 270 > th dose independent rect. 2 16
178 143.72 humidity 90.0 90 < th dose independent rect. 8 7
179 143.73 radiation 40.0 10 < th dose independent rect. 2 18
180 143.77 atmosphere 995.0 270 > th dose independent rect. 18 8
193 143.94 radiation 1.0 270 < th dose dependent rect. 5 21
195 143.98 precipitation 0.1 30 < th dose independent rect. 2 6
196 143.98 precipitation 0.1 30 < th dose dependent rect. 2 6
206 144.07 radiation 30.0 270 < th dose dependent rect. 1 9
216 144.15 wind 5.0 30 < th dose independent rect. 2 6
230 144.30 humidity 50.0 270 > th dose independent rect. 6 7
236 144.41 precipitation 0.1 270 < th dose independent rect. 1 6
238 144.41 precipitation 0.1 270 < th dose dependent rect. 1 6
241 144.45 precipitation 0.1 90 < th dose independent rect. 8 7
242 144.45 precipitation 0.1 90 < th dose dependent rect. 8 7
251 144.49 wind 9.0 270 < th dose independent rect. 2 16
256 144.52 temperature 30.0 270 < th dose dependent rect. 3 2
260 144.55 precipitation 0.1 270 < th dose independent rect. 2 4
261 144.55 precipitation 0.1 270 < th dose dependent rect. 2 4
268 144.59 precipitation 0.1 270 < th dose independent rect. 18 8
269 144.59 precipitation 0.1 270 < th dose dependent rect. 18 8
272 144.61 precipitation 0.1 10 < th dose independent rect. 8 18
273 144.61 precipitation 0.1 10 < th dose dependent rect. 8 18
282 144.72 atmosphere 1015.0 90 < th dose independent rect. 8 7
284 144.73 radiation 1.0 270 > th dose independent rect. 6 8
290 144.75 radiation 20.0 270 < th dose dependent rect. 1 14
307 144.87 radiation 1.0 10 > th dose independent rect. 8 8
319 144.94 radiation 1.0 10 > th dose dependent rect. 8 8
323 144.97 temperature 20.0 10 > th dose independent rect. 8 8
325 144.97 wind 1.0 270 > th dose independent rect. 14 16
332 145.01 wind 9.0 30 < th dose independent rect. 8 18
346 145.12 radiation 1.0 90 > th dose independent rect. 8 7
379 145.26 precipitation 0.1 270 < th dose independent rect. 3 2
380 145.26 precipitation 0.1 270 < th dose dependent rect. 3 2
389 145.31 wind 9.0 1440 < th dose independent rect. 3 6
390 145.31 temperature 10.0 1440 > th dose independent rect. 3 6
393 145.31 humidity 50.0 1440 > th dose independent rect. 3 6
395 145.31 atmosphere 995.0 1440 > th dose independent rect. 3 6
396 145.31 temperature 10.0 1440 > th dose independent rect. 9 18
412 145.40 temperature 10.0 30 > th dose independent rect. 2 6
414 145.40 temperature 30.0 30 < th dose independent rect. 2 6
415 145.40 humidity 50.0 30 > th dose independent rect. 2 6
417 145.40 atmosphere 995.0 30 > th dose independent rect. 2 6
418 145.40 atmosphere 1015.0 30 < th dose independent rect. 2 6
419 145.40 wind 9.0 10 < th dose independent rect. 8 8
420 145.40 temperature 10.0 30 > th dose independent rect. 8 18
421 145.41 radiation 40.0 10 < th dose dependent rect. 2 18
441 145.53 radiation 10.0 270 < th dose independent rect. 1 7
452 145.62 atmosphere 995.0 90 > th dose independent rect. 8 7
454 145.65 wind 9.0 270 < th dose independent rect. 6 20
462 145.70 wind 1.0 90 > th dose independent rect. 8 7
538 145.96 temperature 25.0 270 < th dose independent rect. 3 2
545 145.99 temperature 10.0 10 > th dose independent rect. 8 8
547 145.99 atmosphere 1015.0 10 < th dose independent rect. 8 8
548 145.99 precipitation 0.1 10 < th dose independent rect. 8 8
549 145.99 temperature 10.0 10 > th dose independent rect. 16 16
551 145.99 precipitation 0.1 10 < th dose dependent rect. 8 8
555 146.01 temperature 10.0 270 > th dose independent rect. 1 6
557 146.01 temperature 30.0 270 < th dose independent rect. 1 6
558 146.01 humidity 50.0 270 > th dose independent rect. 1 6
560 146.01 atmosphere 995.0 270 > th dose independent rect. 1 6
561 146.01 atmosphere 1015.0 270 < th dose independent rect. 1 6
562 146.01 radiation 40.0 270 < th dose independent rect. 1 6
592 146.11 radiation 30.0 10 < th dose independent rect. 12 20
593 146.11 atmosphere 995.0 30 > th dose dependent rect. 2 6
599 146.13 radiation 40.0 30 < th dose independent rect. 2 6
601 146.14 wind 9.0 10 < th dose independent rect. 16 16
610 146.17 temperature 30.0 90 < th dose dependent rect. 3 16
621 146.18 temperature 30.0 90 < th dose dependent rect. 3 6
631 146.23 temperature 10.0 270 > th dose independent rect. 2 4
635 146.23 humidity 50.0 270 > th dose independent rect. 2 4
638 146.23 atmosphere 995.0 270 > th dose independent rect. 2 4
639 146.23 atmosphere 1015.0 270 < th dose independent rect. 2 4
640 146.23 radiation 20.0 270 < th dose independent rect. 2 4
644 146.23 temperature 10.0 270 > th dose independent rect. 6 20
652 146.28 atmosphere 995.0 10 > th dose independent rect. 15 17
665 146.34 wind 9.0 90 < th dose dependent rect. 2 6
674 146.38 radiation 40.0 270 < th dose dependent rect. 2 4
685 146.43 temperature 30.0 90 < th dose dependent rect. 3 8
739 146.61 temperature 30.0 270 < th dose dependent rect. 1 6
743 146.62 wind 9.0 270 < th dose dependent rect. 2 4
759 146.69 radiation 40.0 10 < th dose independent rect. 16 16
787 146.82 radiation 30.0 10 < th dose independent rect. 14 18
804 146.88 wind 9.0 270 < th dose dependent rect. 6 19
834 146.90 atmosphere 995.0 10 > th dose independent rect. 8 7
849 146.96 wind 1.0 270 > th dose independent rect. 1 6
861 146.97 radiation 40.0 10 < th dose dependent rect. 12 20
869 146.99 atmosphere 1015.0 90 < th dose dependent rect. 8 7
874 147.02 temperature 20.0 270 > th dose independent rect. 19 18
881 147.04 humidity 90.0 10 < th dose independent rect. 8 8
918 147.13 precipitation 0.1 270 < th dose independent rect. 6 20
920 147.13 precipitation 0.1 270 < th dose dependent rect. 6 20
941 147.18 radiation 40.0 10 < th dose dependent rect. 14 18