Os01g0757500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os01g0757500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.81 | 0.565 | 11.2 | 0.782 | 3.23 | -3.33 | 0.967 | -1.59 | 0.231 | 12 | 28.79 | 7 | 20.5 | -- |
| 147.49 | 0.566 | 11.2 | 0.689 | 3.28 | -3.09 | 0.732 | -- | 0.221 | 12 | 29.5 | 5 | 20.6 | -- |
| 148.12 | 0.567 | 11.2 | 0.746 | 3.25 | -3.37 | -- | -0.874 | 0.214 | 12 | 28.8 | 6 | 20.5 | -- |
| 149.05 | 0.569 | 11.2 | 0.679 | 3.29 | -3.25 | -- | -- | 0.199 | 12 | 29.33 | 6 | 20.6 | -- |
| 230.02 | 0.706 | 11.2 | 1.02 | -- | -3.8 | -- | -1.98 | 0.479 | -- | 50.99 | 69 | 5.42 | -- |
| 231.24 | 0.713 | 11.2 | 1.1 | 3.07 | -- | 1.47 | -- | 0.58 | 13.2 | -- | -- | -- | -- |
| 240.2 | 0.726 | 11.2 | 1.16 | 3.07 | -- | -- | -- | 0.588 | 13.2 | -- | -- | -- | -- |
| 236.7 | 0.717 | 11.2 | 1.08 | -- | -3.37 | -- | -- | 0.507 | -- | 82.67 | 3 | 4.78 | -- |
| 160.41 | 0.59 | 11.3 | -- | 3.3 | -3.57 | -- | -- | 0.102 | 12 | 28.82 | 7 | 20.4 | -- |
| 822.19 | 1.34 | 11.2 | 1.04 | -- | -- | -- | -- | 0.525 | -- | -- | -- | -- | -- |
| 275.38 | 0.776 | 11.2 | -- | 3.05 | -- | -- | -- | 0.459 | 13.2 | -- | -- | -- | -- |
| 266 | 0.76 | 11.3 | -- | -- | -3.59 | -- | -- | 0.345 | -- | 59.85 | 5 | 4.8 | -- |
| 850.53 | 1.36 | 11.3 | -- | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 2 | 15 |
| 9 | 137.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 56 | 146.46 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 69 | 149.59 | temperature | 15 | 10 | > th | dose dependent | sin | 3 | NA |
| 109 | 153.88 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 131 | 155.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 175 | 158.61 | temperature | 25 | 10 | > th | dose dependent | sin | 7 | NA |
| 176 | 158.63 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 17 |
| 197 | 160.03 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 5 |
| 221 | 161.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 263 | 162.72 | radiation | 10 | 90 | < th | dose dependent | sin | 3 | NA |
| 298 | 163.96 | radiation | 1 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 347 | 165.38 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 6 |
| 371 | 166.30 | radiation | 10 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 384 | 166.81 | temperature | 10 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 385 | 166.82 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 22 |
| 402 | 167.38 | radiation | 1 | 90 | > th | dose independent | sin | 2 | NA |
| 409 | 167.59 | radiation | 1 | 90 | < th | dose independent | sin | 2 | NA |
| 415 | 167.73 | radiation | 1 | 270 | > th | dose independent | sin | 7 | NA |
| 430 | 167.89 | radiation | 1 | 270 | < th | dose independent | sin | 6 | NA |
| 440 | 168.24 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 8 |
| 485 | 169.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 13 |
| 518 | 169.84 | radiation | 1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 523 | 169.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 529 | 169.98 | humidity | 70 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 535 | 170.09 | temperature | 25 | 30 | > th | dose independent | sin | 3 | NA |
| 543 | 170.21 | humidity | 80 | 10 | > th | dose dependent | sin | 1 | NA |
| 585 | 170.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 597 | 171.07 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 23 |
| 643 | 171.81 | radiation | 1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 650 | 171.86 | temperature | 25 | 30 | < th | dose independent | sin | 3 | NA |
| 681 | 172.14 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 19 |
| 716 | 172.48 | humidity | 70 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 807 | 173.37 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 14 |
| 814 | 173.45 | radiation | 10 | 90 | < th | dose dependent | rect. | 10 | 22 |
| 925 | 174.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 976 | 175.04 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 18 |
| 990 | 175.21 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 2 |
| 999 | 175.32 | radiation | 1 | 270 | > th | dose independent | rect. | 5 | 5 |