Os01g0748300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os01g0748300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.44 | 0.52 | 8.77 | 1.17 | 0.47 | -1.84 | 0.455 | -0.888 | -0.165 | 2.47 | 17.7 | 4231 | -- | -- |
| 122.68 | 0.516 | 8.74 | 1.32 | 0.473 | -1.71 | 0.445 | -- | -0.127 | 2.39 | 19.78 | 4239 | -- | -- |
| 123.14 | 0.517 | 8.77 | 1.18 | 0.464 | -1.83 | -- | -0.827 | -0.163 | 2.28 | 17.67 | 4256 | -- | -- |
| 123.33 | 0.517 | 8.74 | 1.3 | 0.458 | -1.7 | -- | -- | -0.133 | 2.26 | 19.79 | 4292 | -- | -- |
| 132.91 | 0.537 | 8.76 | 1.2 | -- | -1.79 | -- | -0.785 | -0.154 | -- | 17.7 | 4639 | -- | -- |
| 197.43 | 0.659 | 8.82 | 0.542 | 0.348 | -- | 0.377 | -- | -0.486 | 2.62 | -- | -- | -- | -- |
| 197.87 | 0.659 | 8.82 | 0.533 | 0.348 | -- | -- | -- | -0.488 | 2.26 | -- | -- | -- | -- |
| 133.11 | 0.537 | 8.74 | 1.32 | -- | -1.65 | -- | -- | -0.131 | -- | 19.84 | 4639 | -- | -- |
| 153.88 | 0.578 | 8.83 | -- | 0.379 | -1.21 | -- | -- | -0.538 | 1.1 | 26 | 4626 | -- | -- |
| 205.07 | 0.669 | 8.82 | 0.547 | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
| 205.35 | 0.67 | 8.84 | -- | 0.358 | -- | -- | -- | -0.548 | 2.28 | -- | -- | -- | -- |
| 162.81 | 0.594 | 8.84 | -- | -- | -1.17 | -- | -- | -0.573 | -- | 26.1 | 4662 | -- | -- |
| 212.96 | 0.681 | 8.83 | -- | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 119.31 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 7 |
| 12 | 119.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 16 | 119.60 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 27 | 119.77 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 38 | 119.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 40 | 119.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 6 |
| 44 | 119.99 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 8 |
| 64 | 120.14 | temperature | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 125 | 120.62 | temperature | 10 | 4320 | > th | dose dependent | sin | 7 | NA |
| 282 | 121.43 | temperature | 30 | 4320 | < th | dose dependent | sin | 8 | NA |
| 305 | 121.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 2 |
| 507 | 122.32 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 627 | 122.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 644 | 122.67 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 717 | 122.81 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 723 | 122.81 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 784 | 122.95 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 849 | 123.07 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 937 | 123.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |