Os01g0748200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0748200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.36 | 0.323 | 8.48 | 1.83 | 0.223 | -0.609 | 0.335 | 0.0894 | 0.61 | 22 | 10.71 | 1421 | -- | -- |
| 47.37 | 0.321 | 8.48 | 1.83 | 0.228 | -0.616 | 0.339 | -- | 0.611 | 22.1 | 10.74 | 1415 | -- | -- |
| 47.61 | 0.321 | 8.47 | 1.85 | 0.293 | -0.619 | -- | 0.265 | 0.613 | 21.9 | 10.83 | 1336 | -- | -- |
| 47.67 | 0.322 | 8.48 | 1.84 | 0.303 | -0.634 | -- | -- | 0.618 | 22.3 | 10.83 | 1342 | -- | -- |
| 50.67 | 0.332 | 8.47 | 1.85 | -- | -0.559 | -- | 0.39 | 0.62 | -- | 13.02 | 1444 | -- | -- |
| 58.43 | 0.358 | 8.52 | 1.63 | 0.19 | -- | 0.285 | -- | 0.425 | 21.3 | -- | -- | -- | -- |
| 58.71 | 0.359 | 8.52 | 1.62 | 0.188 | -- | -- | -- | 0.425 | 21.6 | -- | -- | -- | -- |
| 50.44 | 0.331 | 8.47 | 1.83 | -- | -0.59 | -- | -- | 0.622 | -- | 10.72 | 1464 | -- | -- |
| 114.58 | 0.499 | 8.53 | -- | 0.176 | -0.789 | -- | -- | 0.362 | 22.2 | 20 | 4828 | -- | -- |
| 60.79 | 0.364 | 8.51 | 1.62 | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
| 127.86 | 0.529 | 8.56 | -- | 0.193 | -- | -- | -- | 0.244 | 22.2 | -- | -- | -- | -- |
| 103.44 | 0.474 | 8.52 | -- | -- | -0.794 | -- | -- | 0.323 | -- | 9.862 | 15999 | -- | -- |
| 130.13 | 0.532 | 8.55 | -- | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 2 | 45.24 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 3 | 45.31 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 5 | 45.36 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 8 | 45.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 10 | 45.42 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 25 | 45.47 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 37 | 45.51 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 43 | 45.51 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 69 | 45.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 99 | 45.70 | temperature | 20.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 129 | 45.79 | temperature | 20.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 155 | 45.85 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 169 | 45.90 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 172 | 45.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 174 | 45.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 176 | 45.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 183 | 45.94 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 217 | 46.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 223 | 46.03 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 225 | 46.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 232 | 46.04 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 248 | 46.07 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 310 | 46.15 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 316 | 46.15 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 326 | 46.17 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 329 | 46.17 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 346 | 46.19 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 349 | 46.19 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 367 | 46.22 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 390 | 46.24 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 408 | 46.27 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 417 | 46.27 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 427 | 46.28 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 446 | 46.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 455 | 46.29 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 494 | 46.34 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 505 | 46.34 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 536 | 46.36 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 17 |
| 573 | 46.39 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 579 | 46.39 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 586 | 46.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 652 | 46.41 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 2 | 22 |
| 699 | 46.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 707 | 46.43 | temperature | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 727 | 46.44 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 729 | 46.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 801 | 46.48 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 816 | 46.49 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 824 | 46.49 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 837 | 46.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 841 | 46.50 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 846 | 46.50 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 855 | 46.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 888 | 46.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 889 | 46.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 16 |
| 974 | 46.54 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 984 | 46.54 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 22 |