Os01g0738100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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Os01g0738100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.9 | 0.558 | 5.45 | 2.03 | 0.594 | -1.78 | 0.98 | -1 | 0.492 | 4.65 | 28.68 | 42 | -- | -- |
| 142.12 | 0.555 | 5.47 | 1.85 | 0.578 | -1.75 | 0.677 | -- | 0.449 | 4.72 | 28.7 | 41 | -- | -- |
| 142.81 | 0.557 | 5.46 | 1.98 | 0.565 | -1.76 | -- | -0.613 | 0.469 | 4.61 | 27.98 | 46 | -- | -- |
| 143.24 | 0.557 | 5.48 | 1.86 | 0.557 | -1.75 | -- | -- | 0.436 | 4.73 | 28.02 | 50 | -- | -- |
| 151.38 | 0.573 | 5.45 | 2.05 | -- | -1.57 | -- | -0.724 | 0.547 | -- | 25.04 | 43 | -- | -- |
| 184.5 | 0.637 | 5.39 | 2.27 | 0.323 | -- | 0.483 | -- | 0.812 | 9.04 | -- | -- | -- | -- |
| 185.28 | 0.637 | 5.39 | 2.29 | 0.32 | -- | -- | -- | 0.813 | 9.3 | -- | -- | -- | -- |
| 152.29 | 0.575 | 5.47 | 1.94 | -- | -1.51 | -- | -- | 0.518 | -- | 25.2 | 42 | -- | -- |
| 223.72 | 0.697 | 5.55 | -- | 0.813 | -2.54 | -- | -- | 0.0917 | 4.22 | 28.03 | 89 | -- | -- |
| 191.26 | 0.646 | 5.4 | 2.28 | -- | -- | -- | -- | 0.814 | -- | -- | -- | -- | -- |
| 323.01 | 0.841 | 5.45 | -- | 0.323 | -- | -- | -- | 0.558 | 8.76 | -- | -- | -- | -- |
| 242.18 | 0.725 | 5.54 | -- | -- | -2.25 | -- | -- | 0.209 | -- | 24.73 | 144 | -- | -- |
| 328.93 | 0.847 | 5.46 | -- | -- | -- | -- | -- | 0.561 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.41 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 3 | 141.36 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 141.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 5 | 141.58 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 7 | 141.63 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 141.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 10 | 141.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 14 | 142.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 17 | 142.21 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 25 | 142.60 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 33 | 142.85 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 36 | 142.97 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 56 | 143.54 | temperature | 15.0 | 30 | > th | dose dependent | no | NA | NA |
| 75 | 144.02 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 76 | 144.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 77 | 144.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 84 | 144.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 85 | 144.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 109 | 144.62 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 146 | 145.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 147 | 145.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 155 | 145.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 156 | 145.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 164 | 145.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 165 | 145.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 166 | 145.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 201 | 145.66 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 213 | 145.77 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 226 | 145.84 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 272 | 146.42 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 320 | 146.85 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 327 | 146.91 | temperature | 30.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 398 | 147.34 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 503 | 147.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 504 | 147.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 525 | 148.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 583 | 148.29 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 605 | 148.41 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 609 | 148.43 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 619 | 148.46 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 634 | 148.51 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 687 | 148.65 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 739 | 148.84 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 747 | 148.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 777 | 148.94 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 794 | 148.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 801 | 148.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 803 | 148.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 808 | 149.00 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 813 | 149.00 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 14 |
| 814 | 149.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 846 | 149.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 867 | 149.10 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 17 |
| 872 | 149.12 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 899 | 149.17 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 906 | 149.20 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 922 | 149.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 950 | 149.35 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |