Os01g0737800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein farnesyltransferase beta subunit (EC 2.5.1.58) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta).
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Os01g0737800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein farnesyltransferase beta subunit (EC 2.5.1.58) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.54 | 0.185 | 10.2 | -0.167 | 0.641 | 0.456 | 0.0761 | 0.639 | 0.256 | 2.05 | 0.3232 | 5392 | -- | -- |
| 15.7 | 0.185 | 10.2 | -0.188 | 0.63 | 0.55 | 0.129 | -- | 0.264 | 2 | 0.4149 | 5691 | -- | -- |
| 15.56 | 0.184 | 10.2 | -0.17 | 0.641 | 0.459 | -- | 0.63 | 0.256 | 2.05 | 0.3266 | 5390 | -- | -- |
| 15.67 | 0.184 | 10.2 | -0.187 | 0.635 | 0.57 | -- | -- | 0.255 | 2.07 | 0.4124 | 5730 | -- | -- |
| 40.05 | 0.295 | 10.2 | -0.143 | -- | 0.428 | -- | 0.789 | 0.268 | -- | 0.4018 | 5308 | -- | -- |
| 22.71 | 0.223 | 10.2 | -0.000459 | 0.65 | -- | 0.175 | -- | 0.203 | 2.05 | -- | -- | -- | -- |
| 22.82 | 0.224 | 10.2 | -0.00568 | 0.651 | -- | -- | -- | 0.202 | 2.06 | -- | -- | -- | -- |
| 40.27 | 0.296 | 10.2 | -0.193 | -- | 0.573 | -- | -- | 0.254 | -- | 0.4462 | 5309 | -- | -- |
| 16.47 | 0.189 | 10.2 | -- | 0.647 | 0.524 | -- | -- | 0.273 | 2.06 | 0.3882 | 5704 | -- | -- |
| 48.22 | 0.324 | 10.2 | 0.0214 | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
| 22.82 | 0.223 | 10.2 | -- | 0.651 | -- | -- | -- | 0.202 | 2.06 | -- | -- | -- | -- |
| 40.99 | 0.298 | 10.2 | -- | -- | 0.533 | -- | -- | 0.284 | -- | 0.4395 | 5340 | -- | -- |
| 48.24 | 0.324 | 10.2 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 4 | 15.51 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 23 | NA |
| 8 | 15.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 10 | 15.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 12 | 15.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 7 |
| 31 | 15.74 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 12 |
| 40 | 15.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 169 | 15.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 5 |
| 172 | 15.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 173 | 15.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 5 |
| 178 | 16.04 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 187 | 16.08 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 22 | NA |
| 188 | 16.08 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 22 | NA |
| 191 | 16.08 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 22 | NA |
| 199 | 16.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 22 |
| 378 | 16.33 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 392 | 16.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 22 |
| 431 | 16.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 493 | 16.44 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 495 | 16.45 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 496 | 16.45 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 505 | 16.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 506 | 16.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 513 | 16.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 520 | 16.48 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 526 | 16.48 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 540 | 16.48 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 547 | 16.49 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 684 | 16.57 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 691 | 16.58 | temperature | 30.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 697 | 16.58 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 720 | 16.59 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 741 | 16.60 | temperature | 30.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 745 | 16.60 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 809 | 16.62 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 835 | 16.62 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 884 | 16.62 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 895 | 16.63 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |