Os01g0732300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os01g0732300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 729.98 | 1.27 | 7.5 | -3.69 | 1.61 | 2.05 | -0.235 | 1.08 | -2.17 | 18.2 | 71.9 | 1165 | 8.98 | -- |
| 731.91 | 1.26 | 7.5 | -3.81 | 1.6 | 2.11 | -0.44 | -- | -2.18 | 18.1 | 71.92 | 1149 | 8.81 | -- |
| 729.99 | 1.26 | 7.5 | -3.68 | 1.59 | 2.05 | -- | 1.14 | -2.18 | 18.2 | 71.72 | 1162 | 9.25 | -- |
| 732.18 | 1.26 | 7.51 | -3.84 | 1.61 | 2.11 | -- | -- | -2.19 | 18.2 | 71.98 | 1149 | 8.76 | -- |
| 829.32 | 1.34 | 7.43 | -3.67 | -- | 1.81 | -- | 2.5 | -2.09 | -- | 72 | 675 | 11.2 | -- |
| 893.35 | 1.4 | 7.47 | -3.64 | 1.33 | -- | 0.823 | -- | -2.04 | 20.1 | -- | -- | -- | -- |
| 895.03 | 1.4 | 7.47 | -3.66 | 1.34 | -- | -- | -- | -2.03 | 19.8 | -- | -- | -- | -- |
| 797.64 | 1.32 | 7.47 | -4.14 | -- | 2.52 | -- | -- | -2.36 | -- | 72 | 1901 | 8.52 | -- |
| 1119.2 | 1.56 | 7.44 | -- | 1.66 | 1.9 | -- | -- | -1.73 | 18.4 | 71 | 1154 | 8.54 | -- |
| 992.18 | 1.47 | 7.44 | -3.68 | -- | -- | -- | -- | -2.05 | -- | -- | -- | -- | -- |
| 1249.01 | 1.65 | 7.38 | -- | 1.37 | -- | -- | -- | -1.63 | 19.6 | -- | -- | -- | -- |
| 1144.34 | 1.58 | 7.4 | -- | -- | 3.04 | -- | -- | -1.84 | -- | 75 | 1900 | 8.58 | -- |
| 1349.46 | 1.71 | 7.35 | -- | -- | -- | -- | -- | -1.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 760.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 10 | 761.54 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 16 | 762.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 18 |
| 37 | 762.80 | humidity | 80 | 1440 | < th | dose dependent | sin | 17 | NA |
| 39 | 762.80 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 45 | 762.90 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 51 | 763.01 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 61 | 763.20 | humidity | 70 | 1440 | < th | dose independent | sin | 16 | NA |
| 62 | 763.22 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 82 | 763.32 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 96 | 763.48 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 99 | 763.50 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 109 | 763.63 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 114 | 763.68 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 124 | 763.78 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 176 | 764.69 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 190 | 764.93 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 247 | 765.38 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 252 | 765.39 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 253 | 765.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 255 | 765.42 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 277 | 765.52 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 283 | 765.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 305 | 765.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 306 | 765.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 349 | 765.82 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 385 | 766.11 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 393 | 766.17 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 411 | 766.29 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 467 | 766.72 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 555 | 767.35 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 629 | 767.93 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 20 |
| 648 | 768.12 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 22 |
| 723 | 768.62 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 769 | 768.86 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 826 | 769.34 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 843 | 769.45 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 844 | 769.45 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 866 | 769.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 898 | 769.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 937 | 770.18 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 949 | 770.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 966 | 770.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 968 | 770.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 976 | 770.49 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 989 | 770.58 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 996 | 770.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 997 | 770.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 9 |