BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0732300 Os01g0732300|AK108391
         (323 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19650.1  | chr5:6639632-6640297 REVERSE LENGTH=222             60   2e-09
AT2G18500.1  | chr2:8027102-8028049 FORWARD LENGTH=316             59   5e-09

>AT5G19650.1 | chr5:6639632-6640297 REVERSE LENGTH=222
          Length = 221

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 252 GFAVVKRSSDPYEDFRKSMEEMIXXXXXXXXXXXXXXLSAERLLETYLVLNSPRHYPAIL 311
            FAVVK+S DPYEDFR SM EMI                 ++LL+ +L LNS +H+  I+
Sbjct: 155 SFAVVKKSKDPYEDFRTSMVEMIVERQIFAPA------ELQQLLQCFLSLNSRQHHKVIV 208

Query: 312 AAFADVRETLF 322
             F ++  TLF
Sbjct: 209 QVFLEIYATLF 219



>AT2G18500.1 | chr2:8027102-8028049 FORWARD LENGTH=316
          Length = 315

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 243 STASAATDGGFAVVKRSSDPYEDFRKSMEEMIXXXXXXXXXXXXXXLSAERLLETYLVLN 302
           + A+A    G AVVK+S DPYEDF+ SM EMI                 E+LL  +L LN
Sbjct: 218 TMAAAVMVEGVAVVKKSEDPYEDFKGSMMEMIVEKKMFEVA------ELEQLLSCFLSLN 271

Query: 303 SPRHYPAILAAFADV 317
           + RH+ AI+ AF+++
Sbjct: 272 AKRHHRAIVRAFSEI 286



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,598,550
Number of extensions: 134537
Number of successful extensions: 409
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 3
Length of query: 323
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 224
Effective length of database: 8,392,385
Effective search space: 1879894240
Effective search space used: 1879894240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)