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Os01g0719700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to [4Fe-4S] cluster assembly factor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0176) R2 : 0.783
β1 : -1.17 (0.0642) R2dD : 0.163 R2D : 0.0833
β2 : 1.59 (0.0458) R2dC : 0.577 R2C : 0.518
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.585 (0.0375) R2dN8 : 0.155 R2N8 : 0.0519
σ : 0.33
deviance : 49.62
__
_____
C
peak time of C : 6.31
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.94 0.311 12.8 -1.19 1.62 0.568 0.59 0.0448 -0.616 6.67 80.19 1106 -- --
43.93 0.309 12.9 -1.19 1.62 0.566 0.59 -- -0.617 6.68 80.16 1092 -- --
44.8 0.312 12.9 -1.19 1.62 0.563 -- -0.0403 -0.62 6.65 80.1 1106 -- --
44.8 0.312 12.9 -1.18 1.62 0.561 -- -- -0.618 6.65 80.4 1106 -- --
169.67 0.607 12.9 -1.15 -- 0.863 -- 0.0446 -0.611 -- 80.99 1323 -- --
48.9 0.328 12.8 -1.18 1.59 -- 0.538 -- -0.583 6.32 -- -- -- --
49.62 0.33 12.8 -1.17 1.59 -- -- -- -0.585 6.31 -- -- -- --
169.65 0.607 12.9 -1.15 -- 0.913 -- -- -0.609 -- 80.65 1324 -- --
78.98 0.414 12.8 -- 1.65 0.7 -- -- -0.509 6.22 84.62 1708 -- --
180.99 0.629 12.9 -1.13 -- -- -- -- -0.551 -- -- -- -- --
85.68 0.433 12.8 -- 1.57 -- -- -- -0.455 6.35 -- -- -- --
202.42 0.663 12.9 -- -- 0.877 -- -- -0.483 -- 83.6 1315 -- --
214.51 0.684 12.8 -- -- -- -- -- -0.425 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.64 precipitation 0.1 270 < th dose independent rect. 17 18
2 37.64 precipitation 0.1 270 < th dose dependent rect. 17 18
3 37.89 temperature 20.0 270 > th dose independent rect. 11 6
4 38.48 atmosphere 995.0 270 > th dose independent rect. 11 6
5 38.51 wind 9.0 270 < th dose independent rect. 17 18
6 38.53 temperature 10.0 270 > th dose independent rect. 11 6
8 38.53 atmosphere 1015.0 270 < th dose independent rect. 11 6
9 38.53 temperature 10.0 270 > th dose independent rect. 17 18
11 38.59 wind 9.0 270 < th dose independent rect. 11 6
14 38.68 precipitation 0.1 270 < th dose independent rect. 11 6
15 38.68 precipitation 0.1 270 < th dose dependent rect. 11 6
16 38.74 humidity 50.0 270 > th dose independent rect. 17 18
19 38.84 temperature 20.0 270 > th dose independent rect. 12 4
23 38.97 precipitation 0.1 270 < th dose independent rect. 15 22
25 38.97 precipitation 0.1 270 < th dose dependent rect. 15 22
26 38.98 atmosphere 995.0 270 > th dose independent rect. 17 18
30 39.14 precipitation 0.1 270 < th dose independent rect. 7 15
31 39.14 precipitation 0.1 270 < th dose dependent rect. 7 15
36 39.32 radiation 30.0 270 < th dose dependent rect. 22 9
42 39.41 wind 1.0 270 > th dose independent rect. 11 6
43 39.41 precipitation 0.1 270 < th dose independent rect. 16 7
44 39.41 precipitation 0.1 270 < th dose dependent rect. 16 7
46 39.46 atmosphere 995.0 270 > th dose independent rect. 12 4
47 39.47 humidity 50.0 270 > th dose dependent rect. 21 10
49 39.48 radiation 10.0 270 < th dose independent rect. 22 9
52 39.53 radiation 1.0 270 > th dose independent rect. 11 6
59 39.58 humidity 90.0 270 < th dose independent rect. 11 6
64 39.59 wind 1.0 270 > th dose independent rect. 7 15
76 39.65 precipitation 0.1 270 < th dose independent rect. 17 5
78 39.65 precipitation 0.1 270 < th dose dependent rect. 17 5
83 39.68 temperature 10.0 270 > th dose independent rect. 22 9
84 39.68 temperature 30.0 270 < th dose independent rect. 22 9
85 39.68 humidity 50.0 270 > th dose independent rect. 22 9
87 39.68 atmosphere 995.0 270 > th dose independent rect. 22 9
90 39.68 temperature 10.0 270 > th dose independent rect. 7 15
92 39.70 wind 9.0 270 < th dose independent rect. 16 7
93 39.70 wind 9.0 270 < th dose independent rect. 22 9
95 39.72 atmosphere 995.0 270 > th dose independent rect. 23 17
96 39.74 humidity 50.0 270 > th dose independent rect. 11 6
103 39.77 wind 9.0 270 < th dose independent rect. 23 17
105 39.78 radiation 30.0 270 < th dose independent rect. 16 7
109 39.79 temperature 10.0 270 > th dose independent rect. 16 7
111 39.79 temperature 10.0 270 > th dose independent rect. 23 17
118 39.83 wind 9.0 270 < th dose independent rect. 7 15
134 39.92 atmosphere 1015.0 270 < th dose independent rect. 23 17
136 39.94 humidity 50.0 270 > th dose independent rect. 12 4
139 39.95 radiation 40.0 270 < th dose dependent rect. 16 7
143 39.99 wind 9.0 270 < th dose independent rect. 17 5
157 40.03 temperature 10.0 270 > th dose dependent rect. 11 6
158 40.04 temperature 10.0 270 > th dose independent rect. 17 5
159 40.04 radiation 20.0 270 < th dose independent rect. 17 5
163 40.04 temperature 10.0 270 > th dose independent rect. 22 19
177 40.10 wind 1.0 270 > th dose independent rect. 17 18
179 40.11 wind 9.0 270 < th dose independent rect. 22 19
184 40.14 temperature 10.0 270 > th dose independent rect. 13 2
186 40.14 atmosphere 1010.0 270 < th dose independent rect. 13 2
192 40.14 precipitation 0.1 270 < th dose independent rect. 3 9
196 40.14 precipitation 0.1 270 < th dose dependent rect. 3 9
198 40.16 wind 9.0 270 < th dose independent rect. 13 2
204 40.17 radiation 40.0 270 < th dose dependent rect. 17 5
213 40.22 humidity 50.0 270 > th dose independent rect. 17 5
224 40.25 wind 1.0 270 > th dose independent rect. 17 5
228 40.26 atmosphere 1015.0 270 < th dose independent rect. 7 15
233 40.30 wind 1.0 270 > th dose independent rect. 12 4
242 40.33 wind 1.0 270 > th dose independent rect. 16 7
247 40.34 atmosphere 1015.0 270 < th dose independent rect. 17 18
249 40.37 radiation 1.0 270 > th dose independent rect. 12 4
253 40.40 temperature 10.0 270 > th dose dependent rect. 22 9
257 40.44 atmosphere 995.0 270 > th dose independent rect. 17 5
258 40.44 precipitation 0.1 270 < th dose independent rect. 22 9
261 40.44 precipitation 0.1 270 < th dose dependent rect. 22 9
265 40.47 precipitation 0.1 270 < th dose independent rect. 23 17
266 40.47 precipitation 0.1 270 < th dose dependent rect. 23 17
276 40.54 atmosphere 1015.0 270 < th dose independent rect. 22 9
286 40.58 humidity 90.0 270 < th dose independent rect. 17 6
287 40.59 atmosphere 1015.0 270 < th dose independent rect. 17 5
292 40.61 humidity 90.0 270 < th dose independent rect. 12 4
300 40.63 radiation 40.0 10 < th dose independent rect. 13 5
304 40.64 humidity 90.0 270 < th dose independent rect. 18 4
308 40.64 humidity 50.0 270 > th dose independent rect. 23 17
312 40.65 temperature 20.0 10 > th dose independent rect. 14 4
315 40.65 atmosphere 995.0 270 > th dose dependent rect. 12 4
334 40.70 radiation 1.0 270 < th dose independent rect. 22 17
342 40.73 radiation 40.0 270 < th dose independent rect. 17 18
363 40.78 wind 9.0 270 < th dose dependent rect. 11 6
368 40.79 radiation 1.0 270 > th dose independent rect. 17 19
383 40.82 precipitation 0.1 10 < th dose independent rect. 18 20
384 40.82 precipitation 0.1 10 < th dose dependent rect. 18 20
406 40.87 wind 9.0 270 < th dose dependent rect. 17 5
411 40.88 temperature 10.0 270 > th dose independent rect. 3 9
412 40.88 atmosphere 995.0 270 > th dose independent rect. 3 9
413 40.88 atmosphere 1015.0 270 < th dose independent rect. 3 9
415 40.88 temperature 10.0 270 > th dose independent rect. 12 15
416 40.88 wind 9.0 270 < th dose dependent rect. 12 4
430 40.91 wind 9.0 270 < th dose dependent rect. 13 2
440 40.94 temperature 10.0 270 > th dose dependent rect. 13 2
453 40.99 wind 9.0 270 < th dose independent rect. 3 9
459 41.00 radiation 40.0 270 < th dose independent rect. 12 4
468 41.02 atmosphere 1000.0 10 > th dose independent rect. 13 5
474 41.03 radiation 40.0 10 < th dose independent rect. 12 8
475 41.03 atmosphere 995.0 270 > th dose dependent rect. 13 2
505 41.09 radiation 1.0 270 < th dose dependent rect. 22 17
528 41.14 wind 9.0 270 < th dose independent rect. 12 15
598 41.26 temperature 30.0 270 < th dose independent rect. 17 18
602 41.27 precipitation 0.1 10 < th dose independent rect. 14 4
607 41.27 precipitation 0.1 10 < th dose dependent rect. 14 4
609 41.28 wind 9.0 10 < th dose independent rect. 14 4
615 41.29 temperature 10.0 10 > th dose independent rect. 14 4
617 41.29 atmosphere 1010.0 10 < th dose independent rect. 14 4
623 41.29 temperature 10.0 10 > th dose independent rect. 18 20
637 41.32 humidity 90.0 30 < th dose independent rect. 18 20
638 41.32 atmosphere 995.0 10 > th dose independent rect. 18 20
651 41.34 wind 9.0 10 < th dose independent rect. 18 20
657 41.36 wind 1.0 10 > th dose independent rect. 14 4
671 41.38 temperature 30.0 270 < th dose independent rect. 17 5
679 41.39 humidity 90.0 10 < th dose independent rect. 14 4
686 41.40 atmosphere 995.0 270 > th dose independent rect. 12 15
699 41.43 radiation 40.0 270 < th dose independent rect. 11 6
701 41.43 humidity 50.0 270 > th dose independent rect. 3 9
748 41.47 atmosphere 1015.0 270 < th dose dependent rect. 11 6
752 41.48 temperature 10.0 10 > th dose dependent rect. 14 4
801 41.53 radiation 1.0 270 > th dose independent rect. 4 7
842 41.59 atmosphere 1015.0 270 < th dose dependent rect. 13 2
852 41.60 atmosphere 1015.0 270 < th dose dependent rect. 12 4
858 41.61 humidity 90.0 30 < th dose independent rect. 20 18
883 41.64 temperature 20.0 10 > th dose independent rect. 13 7
896 41.65 temperature 20.0 270 > th dose independent rect. 12 16
897 41.65 temperature 20.0 10 > th dose independent rect. 1 17
899 41.65 humidity 50.0 10 > th dose independent rect. 18 20
901 41.66 atmosphere 1000.0 10 > th dose independent rect. 13 7
907 41.67 precipitation 0.1 10 < th dose independent rect. 20 17
909 41.67 humidity 90.0 270 < th dose independent rect. 17 18
911 41.67 precipitation 0.1 10 < th dose dependent rect. 20 17
922 41.69 temperature 30.0 10 < th dose independent rect. 13 5
940 41.71 humidity 60.0 10 > th dose independent rect. 13 5