Os01g0719600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os01g0719600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 266.66 | 0.767 | 9.99 | -4.93 | 0.217 | 3.6 | 1.63 | -11.2 | -1.16 | 4.27 | 25.41 | 889 | -- | -- |
| 307.1 | 0.816 | 9.83 | -3.15 | 0.185 | 2.66 | 1.83 | -- | -0.943 | 4.38 | 23.47 | 855 | -- | -- |
| 273.85 | 0.771 | 9.99 | -4.95 | 0.206 | 3.56 | -- | -11.2 | -1.15 | 3.1 | 25.48 | 901 | -- | -- |
| 306.32 | 0.815 | 9.71 | -2.86 | 0.329 | 2.38 | -- | -- | -0.616 | 20.6 | 25.7 | 987 | -- | -- |
| 275.27 | 0.773 | 10 | -4.99 | -- | 3.55 | -- | -10.8 | -1.19 | -- | 25.34 | 933 | -- | -- |
| 452.55 | 0.997 | 9.73 | -2.29 | 0.896 | -- | -0.248 | -- | -0.514 | 22 | -- | -- | -- | -- |
| 452.75 | 0.996 | 9.73 | -2.28 | 0.895 | -- | -- | -- | -0.514 | 22.1 | -- | -- | -- | -- |
| 309.37 | 0.819 | 9.74 | -2.91 | -- | 2.54 | -- | -- | -0.706 | -- | 25.2 | 939 | -- | -- |
| 509.62 | 1.05 | 9.62 | -- | 0.595 | 1.53 | -- | -- | -0.136 | 21 | 27.52 | 1064 | -- | -- |
| 501.18 | 1.05 | 9.7 | -2.27 | -- | -- | -- | -- | -0.513 | -- | -- | -- | -- | -- |
| 589.9 | 1.14 | 9.67 | -- | 0.887 | -- | -- | -- | -0.26 | 21.9 | -- | -- | -- | -- |
| 520.12 | 1.06 | 9.65 | -- | -- | 1.95 | -- | -- | -0.301 | -- | 25.74 | 910 | -- | -- |
| 637.03 | 1.18 | 9.64 | -- | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 264.72 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 2 | 268.26 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |
| 3 | 269.54 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 9 | 272.50 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 40 | 274.06 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 52 | 274.46 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 61 | 275.14 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 66 | 275.33 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 77 | 276.08 | temperature | 25 | 720 | > th | dose dependent | sin | 20 | NA |
| 96 | 277.14 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 111 | 278.28 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 114 | 278.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 115 | 278.45 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 123 | 278.84 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |
| 134 | 279.41 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 140 | 279.73 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 181 | 281.50 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 187 | 281.70 | radiation | 1 | 720 | < th | dose independent | sin | 14 | NA |
| 191 | 282.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 193 | 282.04 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 213 | 282.78 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 23 |
| 242 | 284.54 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 23 |
| 259 | 285.52 | radiation | 1 | 720 | < th | dose independent | rect. | 21 | 23 |
| 265 | 285.75 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 279 | 286.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 280 | 286.23 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 352 | 287.06 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 362 | 287.34 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 375 | 287.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 419 | 288.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 424 | 288.72 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 428 | 288.76 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 432 | 288.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 445 | 289.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 455 | 289.18 | radiation | 1 | 1440 | > th | dose independent | sin | 15 | NA |
| 458 | 289.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 465 | 289.39 | radiation | 1 | 720 | > th | dose independent | sin | 13 | NA |
| 576 | 291.23 | radiation | 1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 587 | 291.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 643 | 291.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 674 | 292.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 691 | 292.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 719 | 292.46 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 723 | 292.49 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 12 |
| 763 | 292.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 905 | 294.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 950 | 294.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 970 | 294.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 993 | 294.71 | radiation | 1 | 720 | < th | dose dependent | sin | 1 | NA |