BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0719600 Os01g0719600|AK070988
(142 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24450.1 | chr3:8880286-8881611 REVERSE LENGTH=141 120 2e-28
AT2G37390.1 | chr2:15694300-15695461 FORWARD LENGTH=260 85 1e-17
AT5G02600.2 | chr5:584486-586855 REVERSE LENGTH=320 82 7e-17
AT2G28660.1 | chr2:12295419-12296944 FORWARD LENGTH=266 82 9e-17
AT3G53530.2 | chr3:19845199-19846583 FORWARD LENGTH=249 78 1e-15
AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167 64 3e-11
AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353 64 4e-11
AT1G66240.1 | chr1:24686445-24687327 REVERSE LENGTH=107 62 9e-11
AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474 60 3e-10
AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588 59 8e-10
AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160 58 1e-09
AT3G56240.1 | chr3:20863460-20864402 REVERSE LENGTH=122 58 2e-09
AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179 56 5e-09
AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359 55 1e-08
AT5G05365.1 | chr5:1590125-1590672 FORWARD LENGTH=78 55 2e-08
AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153 55 2e-08
AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578 54 4e-08
AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154 53 5e-08
AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184 53 6e-08
AT4G27590.2 | chr4:13771224-13772594 FORWARD LENGTH=333 51 2e-07
AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365 50 3e-07
AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393 49 6e-07
AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291 49 8e-07
AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151 49 1e-06
AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263 48 2e-06
AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148 47 3e-06
AT3G21490.1 | chr3:7573065-7573669 FORWARD LENGTH=137 47 3e-06
AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154 47 3e-06
AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150 47 4e-06
AT3G02960.1 | chr3:667245-668626 REVERSE LENGTH=247 46 7e-06
>AT3G24450.1 | chr3:8880286-8881611 REVERSE LENGTH=141
Length = 140
Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 5/141 (3%)
Query: 1 MGRKLGFEKVLDCFSLALCTNACVCIHSVXXXXXXXXXXXXLVSSQLE--ELVKLKDLVG 58
MG+ +V DC L +C C++++ + SS + ++++LKD+V
Sbjct: 1 MGKLQKIGRVWDCLFLPTNQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKDVVA 60
Query: 59 G--AKTLAFHLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDIT 116
+TLAFHL+PK VEL+VSMHCYGCAKKV+KHISK+DGVT ++V+LESKKVVV G+I
Sbjct: 61 ADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNIL 120
Query: 117 PYEVLASVSKVMKFAELWVAP 137
P +VL S+ KV K A+LW +P
Sbjct: 121 PVDVLESICKV-KNAQLWSSP 140
>AT2G37390.1 | chr2:15694300-15695461 FORWARD LENGTH=260
Length = 259
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 61 KTLAFHLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEV 120
KT + + V L+VS+HC GC KV+KH+++M GVTSF +D +KKV V GDITP E+
Sbjct: 172 KTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEI 231
Query: 121 LASVSKVMKFAELWVAP 137
L S+SKV K A+ W P
Sbjct: 232 LDSISKV-KNAQFWTNP 247
>AT5G02600.2 | chr5:584486-586855 REVERSE LENGTH=320
Length = 319
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 72 VELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMKFA 131
V LRVS+HC GCA KV+KH+SK+ GVTS+ +D +KKV V GD+TP VLAS+SKV K A
Sbjct: 252 VVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKV-KNA 310
Query: 132 ELW 134
+ W
Sbjct: 311 QFW 313
>AT2G28660.1 | chr2:12295419-12296944 FORWARD LENGTH=266
Length = 265
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 72 VELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMKFA 131
V LRVS+HC GC KV+KHISKM+GVTS+ +DL +KKV V+G ITP ++ S+SKV KFA
Sbjct: 185 VVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKV-KFA 243
Query: 132 ELW 134
+LW
Sbjct: 244 QLW 246
>AT3G53530.2 | chr3:19845199-19846583 FORWARD LENGTH=249
Length = 248
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 72 VELRVSMHCY--GCAKKVQKHISKMD-GVTSFEVDLESKKVVVIGDITPYEVLASVSKVM 128
V LRVS+HC+ GC KV+KH+SKM GVTSF +D SKKV V GDITP EVL +SKV
Sbjct: 170 VVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV- 228
Query: 129 KFAELWVAP 137
K A+ W P
Sbjct: 229 KNAQFWTPP 237
>AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167
Length = 166
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 55 DLVGGAKTLAFHLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGD 114
D + G L L VEL V M C GC KKV++ ISK+DGV + E+D++ +KV V G
Sbjct: 3 DWIHGNSRLPIAL--SIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGY 60
Query: 115 ITPYEVLASVSKVMKFAELWVAP 137
+ EVL V + + AE W P
Sbjct: 61 VDREEVLKMVKRTGRTAEYWPFP 83
>AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353
Length = 352
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 74 LRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMKFAEL 133
LRVS+HC GC +K++K +SK+DGV + +D++ +KV VIG++ P ++ + K + AEL
Sbjct: 34 LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93
Query: 134 W 134
W
Sbjct: 94 W 94
>AT1G66240.1 | chr1:24686445-24687327 REVERSE LENGTH=107
Length = 106
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+TV LRV+M C GC V++ + KM+GV SF+VD++ +KV V G++ P VL +V+K K
Sbjct: 33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 92
Query: 130 FAELWVA 136
W A
Sbjct: 93 KTAFWEA 99
>AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474
Length = 473
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 67 LEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSK 126
++ +T L+V++HC GC +KV+K + K++GV + ++D E KV V G + P ++ ++K
Sbjct: 7 MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAK 66
Query: 127 VMKFAELWVAP 137
K AE+W AP
Sbjct: 67 SGKHAEIWGAP 77
>AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588
Length = 587
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 67 LEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSK 126
++ +T L+V++HC GC +KV+K + K++GV + ++D E KV V G++ P ++ + K
Sbjct: 7 MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66
Query: 127 VMKFAELWVAP 137
K AE+W AP
Sbjct: 67 SGKHAEIWGAP 77
>AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160
Length = 159
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+T+E+RV M C GC +V+ + KM GV + E+D+ +KV V G +VL V K +
Sbjct: 11 QTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGR 70
Query: 130 FAELWVAP 137
AELW P
Sbjct: 71 RAELWQLP 78
>AT3G56240.1 | chr3:20863460-20864402 REVERSE LENGTH=122
Length = 121
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+TV L+V M C GC V + + KM+GV SF++D++ +KV V G++ P V +VSK K
Sbjct: 3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62
Query: 130 FAELW 134
W
Sbjct: 63 KTSYW 67
>AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179
Length = 178
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 63 LAFHLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLA 122
+A L +T++L+V M C GC + V+ I K+ GV S EV+LE ++V V+G + +VL
Sbjct: 39 MARPLSLQTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLK 98
Query: 123 SVSKVMKFAELWVAPN 138
+V + K AE W P+
Sbjct: 99 AVRRAGKRAEFWPYPD 114
>AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359
Length = 358
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+T LRV++HC GC KKV+K + +++GV +++ E +KV V G + ++ + K K
Sbjct: 13 QTFSLRVNIHCEGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAGK 72
Query: 130 FAELWVAPN 138
AELW +PN
Sbjct: 73 HAELW-SPN 80
>AT5G05365.1 | chr5:1590125-1590672 FORWARD LENGTH=78
Length = 77
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 72 VELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMKFA 131
VEL+V++HC C +K+ K I K++ + +++VD + KV V G++T +V+ + KV K A
Sbjct: 5 VELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKVRKAA 64
Query: 132 ELWVAPNS 139
W N
Sbjct: 65 VKWDQDNQ 72
>AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153
Length = 152
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+TV ++V M C GC ++V+ +S M GV S EV+ + KV V G + P +VL + + K
Sbjct: 28 QTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGK 87
Query: 130 FAELW 134
AE+W
Sbjct: 88 KAEIW 92
>AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578
Length = 577
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 74 LRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMKFAEL 133
L+V++HC GC KV+K + K++GV S + D+E +V V G+I P ++ +SK K AE+
Sbjct: 14 LKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEI 73
>AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154
Length = 153
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVS-KVM 128
+TVE++V M C GC +KV++ + M GV+S ++ ++ KV V+G + P +V+A +S +
Sbjct: 26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85
Query: 129 KFAELW 134
K ELW
Sbjct: 86 KKVELW 91
>AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184
Length = 183
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+TVEL+V M C GC + V+ ISK+ GV S EVD E +V V+G + +VL +V + K
Sbjct: 51 QTVELKVRMCCTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAGK 110
Query: 130 FAELWVAP 137
AE P
Sbjct: 111 RAEFSPYP 118
>AT4G27590.2 | chr4:13771224-13772594 FORWARD LENGTH=333
Length = 332
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 67 LEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSK 126
+E + VE+ V ++ YGC KKV++ +S + G+ S +VD ++KV V G +VLA V K
Sbjct: 13 VEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVWGICNKLDVLAMVKK 72
Query: 127 VMKFAELW 134
K A W
Sbjct: 73 KRKEARFW 80
>AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365
Length = 364
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
K+ L+VS+HC GC +KV+K ++ ++GV ++D++ KV VIG I+P +L ++K K
Sbjct: 40 KSCTLKVSIHCEGCKRKVKKILTSIEGVFKVDIDVKQHKVTVIGIISPEILLKKLNKAGK 99
Query: 130 FAE 132
AE
Sbjct: 100 NAE 102
>AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393
Length = 392
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 71 TVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVS-KVMK 129
TV +++ MHC GC KK+++ GV ++D +S K+ VIG++ P EV V+ K+ +
Sbjct: 25 TVVMKLDMHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIKR 84
Query: 130 FAEL--WVAP 137
EL VAP
Sbjct: 85 PVELVSTVAP 94
>AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291
Length = 290
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 71 TVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSK 126
TV LRV MHC CA ++QK I +M GV S E D ++ +V V G TP +++ + K
Sbjct: 132 TVVLRVHMHCEACAMEIQKRIMRMKGVESVEPDFKASQVSVKGVFTPEKLVEFIYK 187
>AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151
Length = 150
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 70 KTVELRVS-MHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVM 128
+TV LRV+ + C GC +K++ +S + GV S +VD++ +KV V G I P +VL +
Sbjct: 26 QTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTK 85
Query: 129 KFAELW 134
K ELW
Sbjct: 86 KKVELW 91
>AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263
Length = 262
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 67 LEP-KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVS 125
EP KT L+V+++C GC KV+K + K++GV S ++D + + V+V G++ P ++ ++
Sbjct: 6 YEPLKTYFLKVNINCQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEILVKKLN 65
Query: 126 KVMKFAEL-WVAP 137
K K A+L ++ P
Sbjct: 66 KRGKHAQLMFLTP 78
>AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148
Length = 147
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASV-SKVM 128
+ VE++V M C GC ++V+K + M GV+ VD + K+ V G + P +V+ V +
Sbjct: 19 QKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTG 78
Query: 129 KFAELW 134
K AELW
Sbjct: 79 KKAELW 84
>AT3G21490.1 | chr3:7573065-7573669 FORWARD LENGTH=137
Length = 136
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 72 VELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITP 117
VE VSMHC C +K+ + ISK GV +F D+ + KVVV G I P
Sbjct: 16 VEFNVSMHCNDCERKIARVISKFKGVETFVTDMINHKVVVRGKIDP 61
>AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154
Length = 153
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 66 HLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLAS-V 124
H +TV++RV + C GC +KV++ + M G+ ++ ++KV V+G + P +V+A +
Sbjct: 21 HKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARII 80
Query: 125 SKVMKFAELW 134
+ K AEL+
Sbjct: 81 HRTGKRAELY 90
>AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150
Length = 149
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVMK 129
+TV+++V M C GC ++V+ + +M GV S EV+ + ++ V G + P +VL V K
Sbjct: 26 QTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGK 85
Query: 130 FAELW 134
AE W
Sbjct: 86 KAEFW 90
>AT3G02960.1 | chr3:667245-668626 REVERSE LENGTH=247
Length = 246
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 70 KTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEVLASVSKVM- 128
KT LR++MHC GC ++++ I K+ G+ S E D VVV G + P +++ + K +
Sbjct: 126 KTAILRMNMHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLG 185
Query: 129 KFAEL 133
K AEL
Sbjct: 186 KHAEL 190
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,623,446
Number of extensions: 80298
Number of successful extensions: 259
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 37
Length of query: 142
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 53
Effective length of database: 8,666,545
Effective search space: 459326885
Effective search space used: 459326885
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 106 (45.4 bits)