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Os01g0714100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0169) R2 : 0.00683
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0629 (0.0355) R2dN8 : 0.00882 R2N8 : 0.00683
σ : 0.318
deviance : 46.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.81 0.214 10.1 1.01 0.356 0.235 -0.41 1.46 0.199 6.23 20 3099 -- --
23.46 0.226 10.1 0.549 0.359 0.21 -0.394 -- 0.0443 6.23 24.3 47520 -- --
21.21 0.214 10.1 1.01 0.354 0.234 -- 1.46 0.201 6.24 20.02 3177 -- --
23.49 0.226 10.1 0.556 0.35 0.202 -- -- 0.038 6.34 27.6 47520 -- --
27.68 0.245 10.1 1.02 -- 0.224 -- 1.38 0.203 -- 20.42 3036 -- --
23.93 0.229 10.1 0.767 0.352 -- -0.388 -- 0.14 6.21 -- -- -- --
24.3 0.231 10.1 0.763 0.35 -- -- -- 0.141 6.25 -- -- -- --
29.33 0.252 10.1 0.997 -- -0.326 -- -- 0.198 -- 14.6 18792 -- --
26.47 0.24 10.2 -- 0.35 0.529 -- -- -0.152 6.41 26.21 47520 -- --
30.65 0.259 10.1 0.773 -- -- -- -- 0.149 -- -- -- -- --
39.65 0.295 10.1 -- 0.361 -- -- -- 0.056 6.14 -- -- -- --
32.82 0.267 10.2 -- -- 0.536 -- -- -0.149 -- 26.22 47520 -- --
46.4 0.318 10.1 -- -- -- -- -- 0.0629 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.06 radiation 1 43200 < th dose independent rect. 15 2
2 21.06 temperature 20 4320 > th dose independent rect. 5 18
3 21.07 radiation 1 43200 > th dose independent rect. 15 2
10 21.10 temperature 20 4320 < th dose independent rect. 5 18
12 21.10 temperature 20 4320 > th dose independent rect. 7 21
13 21.11 temperature 20 4320 < th dose independent rect. 21 2
44 21.14 temperature 20 4320 > th dose independent rect. 18 18
50 21.14 temperature 20 4320 < th dose independent rect. 7 21
98 21.17 temperature 20 4320 > th dose independent sin 16 NA
99 21.17 temperature 20 4320 > th dose independent no NA NA
100 21.17 temperature 20 4320 < th dose independent rect. 19 5
107 21.17 temperature 20 4320 < th dose independent rect. 18 18
119 21.18 radiation 1 14400 > th dose independent rect. 6 1
137 21.18 temperature 20 4320 > th dose independent rect. 10 23
145 21.19 temperature 20 4320 > th dose independent rect. 21 2
146 21.19 temperature 20 4320 > th dose independent rect. 6 3
150 21.19 temperature 20 4320 > th dose independent rect. 17 10
181 21.20 temperature 20 4320 < th dose independent no NA NA
182 21.20 radiation 1 14400 < th dose independent rect. 6 1
215 21.21 temperature 20 4320 < th dose independent sin 15 NA
244 21.21 temperature 20 4320 < th dose independent rect. 10 23
247 21.21 radiation 1 43200 < th dose dependent rect. 11 7
269 21.23 temperature 20 4320 > th dose independent rect. 19 5
298 21.24 temperature 20 4320 < th dose independent rect. 6 3
300 21.24 temperature 20 4320 > th dose independent rect. 17 7
303 21.24 temperature 20 4320 < th dose independent rect. 17 11
320 21.24 wind 1 43200 < th dose dependent rect. 18 2
373 21.27 humidity 90 43200 > th dose independent rect. 11 1
438 21.29 temperature 20 4320 < th dose independent rect. 10 14
460 21.30 atmosphere 1010 43200 > th dose independent rect. 12 1
461 21.30 atmosphere 1010 43200 < th dose independent rect. 12 1
468 21.30 radiation 1 43200 > th dose independent rect. 6 11
483 21.31 atmosphere 1010 43200 > th dose independent rect. 12 3
486 21.31 atmosphere 1010 43200 < th dose independent rect. 12 5
487 21.31 temperature 20 4320 < th dose independent rect. 5 6
496 21.31 radiation 1 43200 < th dose independent rect. 6 11
519 21.32 atmosphere 1010 43200 > th dose independent rect. 14 1
520 21.32 atmosphere 1010 43200 > th dose independent rect. 16 1
521 21.32 atmosphere 1010 43200 < th dose independent rect. 14 1
531 21.32 atmosphere 1010 43200 > th dose independent rect. 16 3
567 21.33 atmosphere 1010 43200 > th dose independent rect. 18 1
615 21.34 temperature 20 4320 < th dose independent sin 3 NA
635 21.34 temperature 20 4320 > th dose independent rect. 2 10
714 21.35 atmosphere 1010 43200 > th dose dependent rect. 12 1
718 21.36 humidity 90 14400 > th dose independent rect. 23 1
777 21.36 temperature 15 4320 > th dose dependent rect. 21 1
778 21.36 atmosphere 1010 43200 > th dose dependent rect. 2 1
793 21.37 atmosphere 1010 43200 < th dose independent sin 23 NA
861 21.37 radiation 1 43200 < th dose dependent sin 2 NA
863 21.37 temperature 25 4320 < th dose dependent rect. 21 1
879 21.38 atmosphere 1010 43200 > th dose independent sin 22 NA
882 21.38 atmosphere 1010 43200 < th dose independent sin 21 NA
935 21.38 radiation 1 43200 < th dose independent rect. 2 15
960 21.38 radiation 1 43200 < th dose independent rect. 20 21
962 21.38 atmosphere 1010 43200 > th dose dependent sin 3 NA
966 21.38 radiation 1 43200 < th dose dependent sin 0 NA
971 21.38 atmosphere 1010 43200 > th dose dependent rect. 9 1