Os01g0713700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Rev interacting protein mis3-like.
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Os01g0713700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Rev interacting protein mis3-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.08 | 0.382 | 7.09 | 1.34 | 0.636 | -1.43 | 0.308 | 1.38 | 0.247 | 15.3 | 14 | 558 | -- | -- |
| 67.46 | 0.383 | 7.12 | 1.11 | 0.649 | -1.41 | 0.387 | -- | 0.187 | 15.3 | 12.11 | 551 | -- | -- |
| 66.26 | 0.379 | 7.08 | 1.38 | 0.701 | -1.45 | -- | 1.63 | 0.257 | 15.2 | 14.2 | 476 | -- | -- |
| 67.93 | 0.384 | 7.11 | 1.11 | 0.642 | -1.4 | -- | -- | 0.187 | 15.3 | 11.72 | 559 | -- | -- |
| 75.33 | 0.404 | 7.08 | 1.42 | -- | -1.42 | -- | 1.24 | 0.269 | -- | 13.17 | 1030 | -- | -- |
| 90.55 | 0.446 | 7.15 | 0.772 | 0.54 | -- | 0.315 | -- | -0.0261 | 13 | -- | -- | -- | -- |
| 90.97 | 0.447 | 7.15 | 0.784 | 0.54 | -- | -- | -- | -0.0243 | 13 | -- | -- | -- | -- |
| 76.62 | 0.408 | 7.11 | 1.17 | -- | -1.4 | -- | -- | 0.201 | -- | 13.28 | 1018 | -- | -- |
| 96.81 | 0.458 | 7.15 | -- | 0.605 | -0.903 | -- | -- | -0.00031 | 14.5 | 8.505 | 476 | -- | -- |
| 109.07 | 0.488 | 7.16 | 0.763 | -- | -- | -- | -- | -0.0348 | -- | -- | -- | -- | -- |
| 107.15 | 0.484 | 7.17 | -- | 0.527 | -- | -- | -- | -0.112 | 12.9 | -- | -- | -- | -- |
| 108.25 | 0.485 | 7.15 | -- | -- | -0.896 | -- | -- | 0.0047 | -- | 15.56 | 970 | -- | -- |
| 124.44 | 0.521 | 7.18 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.21 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 2 | 64.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 10 | 64.57 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 11 | 64.57 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 14 | 64.69 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 15 | 64.77 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 18 | 64.89 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 25 | 65.04 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 27 | 65.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 29 | 65.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 35 | 65.32 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 36 | 65.34 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 54 | 65.59 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 61 | 65.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 67 | 65.77 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 79 | 65.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 83 | 65.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 84 | 65.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 139 | 66.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 143 | 66.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 152 | 66.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 176 | 66.67 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 177 | 66.68 | wind | 9 | 43200 | > th | dose dependent | sin | 14 | NA |
| 184 | 66.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 189 | 66.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 198 | 66.84 | wind | 9 | 43200 | > th | dose independent | sin | 12 | NA |
| 206 | 66.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 242 | 67.08 | wind | 9 | 43200 | < th | dose independent | sin | 12 | NA |
| 296 | 67.22 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 313 | 67.25 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 367 | 67.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 811 | 67.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 829 | 67.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 991 | 67.99 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 19 |