Os01g0708500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 730 family protein.
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Os01g0708500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein 730 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.45 | 0.601 | 7.59 | -2.06 | 1.38 | -0.464 | -0.167 | 2.54 | -0.124 | 22.1 | 30.08 | 1423 | -- | -- |
| 176.54 | 0.619 | 7.62 | -2.25 | 1.45 | -0.422 | 0.411 | -- | -0.182 | 22 | 24.23 | 1432 | -- | -- |
| 163.56 | 0.596 | 7.59 | -2.06 | 1.38 | -0.464 | -- | 2.52 | -0.124 | 22.1 | 30.08 | 1422 | -- | -- |
| 173.48 | 0.613 | 7.59 | -2.42 | 1.4 | -0.5 | -- | -- | -0.178 | 21.9 | 49.9 | 1433 | -- | -- |
| 268.43 | 0.767 | 7.64 | -2.54 | -- | -0.61 | -- | 0.902 | -0.382 | -- | 26.28 | 1571 | -- | -- |
| 179.74 | 0.629 | 7.68 | -2.55 | 1.37 | -- | -0.115 | -- | -0.379 | 22.1 | -- | -- | -- | -- |
| 179.79 | 0.628 | 7.68 | -2.54 | 1.37 | -- | -- | -- | -0.379 | 22.1 | -- | -- | -- | -- |
| 271.89 | 0.771 | 7.64 | -2.49 | -- | -0.595 | -- | -- | -0.381 | -- | 26.28 | 1571 | -- | -- |
| 331.17 | 0.848 | 7.58 | -- | 1.35 | -0.579 | -- | -- | 0.09 | 22.1 | 40.06 | 1455 | -- | -- |
| 292.62 | 0.799 | 7.64 | -2.52 | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
| 350.11 | 0.875 | 7.62 | -- | 1.36 | -- | -- | -- | -0.0959 | 21.9 | -- | -- | -- | -- |
| 399.2 | 0.934 | 7.58 | -- | -- | -0.899 | -- | -- | -0.0959 | -- | 20 | 1572 | -- | -- |
| 460.72 | 1 | 7.58 | -- | -- | -- | -- | -- | -0.0975 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.20 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 8 | 151.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 10 | 151.33 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 12 | 16 |
| 33 | 153.02 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 77 | 154.65 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 84 | 154.94 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 6 |
| 88 | 155.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 119 | 155.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 120 | 155.83 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 138 | 155.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 3 | 9 |
| 145 | 156.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 155 | 156.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 185 | 156.60 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 210 | 156.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 7 |
| 215 | 156.86 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 217 | 156.87 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 241 | 157.20 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 255 | 157.38 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 18 | 7 |
| 267 | 157.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 276 | 157.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 295 | 157.64 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 357 | 158.15 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 4 |
| 358 | 158.17 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 9 |
| 377 | 158.34 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 8 |
| 380 | 158.38 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 387 | 158.42 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 388 | 158.42 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 389 | 158.43 | radiation | 1.0 | 270 | > th | dose independent | sin | 9 | NA |
| 430 | 158.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 432 | 158.70 | radiation | 1.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 437 | 158.72 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 439 | 158.74 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 449 | 158.80 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 16 |
| 460 | 158.86 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 15 |
| 461 | 158.87 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 6 |
| 463 | 158.87 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 470 | 158.91 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 10 |
| 482 | 158.96 | humidity | 80.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 488 | 158.98 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 507 | 159.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 521 | 159.11 | humidity | 90.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 525 | 159.12 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 540 | 159.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 544 | 159.22 | radiation | 1.0 | 270 | < th | dose independent | sin | 8 | NA |
| 551 | 159.28 | humidity | 80.0 | 30 | < th | dose independent | rect. | 22 | 14 |
| 558 | 159.33 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 566 | 159.38 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 6 |
| 570 | 159.39 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 582 | 159.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 9 |
| 583 | 159.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 616 | 159.62 | radiation | 10.0 | 30 | > th | dose independent | sin | 6 | NA |
| 636 | 159.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 4 |
| 725 | 159.90 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 751 | 159.95 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 16 |
| 760 | 159.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 761 | 159.99 | humidity | 80.0 | 90 | > th | dose independent | rect. | 24 | 11 |
| 785 | 160.03 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 798 | 160.09 | radiation | 20.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 809 | 160.12 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 814 | 160.13 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 4 |
| 824 | 160.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 833 | 160.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 7 |
| 861 | 160.27 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 867 | 160.28 | wind | 1.0 | 30 | > th | dose independent | rect. | 18 | 7 |
| 874 | 160.30 | humidity | 80.0 | 90 | > th | dose independent | rect. | 24 | 15 |
| 876 | 160.31 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 883 | 160.32 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 890 | 160.35 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 4 |
| 892 | 160.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 7 |
| 893 | 160.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 942 | 160.46 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 946 | 160.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 947 | 160.47 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 974 | 160.53 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 1 |