BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0708500 Os01g0708500|AK061091
(223 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 298 2e-81
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 294 3e-80
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 289 6e-79
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 273 4e-74
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 271 3e-73
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 270 4e-73
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 256 8e-69
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 221 2e-58
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 166 9e-42
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 168/201 (83%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
R RF +ICVFCGS++G+R VF DAA++LG ELV R I+LVYGGGSVGLMGLI++ V +GG
Sbjct: 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGG 65
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEM 134
VLG+IPKALMP EISG +VG+V++V+DMHERKA MA++++AFIALPGGYGTMEELLEM
Sbjct: 66 LHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEM 125
Query: 135 ITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194
ITWSQLGIH K VGLLNVDGYY+ LLALFD G EGFIK R I+VSAPTA EL+ KME
Sbjct: 126 ITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKME 185
Query: 195 QYTRSHQEVAPRTSWEMSELG 215
+YT SH VA SW++ ELG
Sbjct: 186 EYTPSHMHVASHESWKVEELG 206
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 294 bits (752), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 168/207 (81%)
Query: 17 RFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGGCG 76
+F RICVFCGS+AGN+ + DAA++LG ELVSR I+LVYGGGS+GLMGLI+Q V +GG
Sbjct: 6 KFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRH 65
Query: 77 VLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEMIT 136
V+GVIPK LMP EI+G +VGEVK V+DMH+RKAEMA+ SDAFIALPGGYGT+EELLE+IT
Sbjct: 66 VIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 125
Query: 137 WSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKMEQY 196
W+QLGIHDKPVGLLNV+GYY+ LL+ DK EGFI R IIVSAP+A EL++K+E Y
Sbjct: 126 WAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLEDY 185
Query: 197 TRSHQEVAPRTSWEMSELGYGKTPEES 223
H++VA + SWEM ++G T E S
Sbjct: 186 VPRHEKVASKKSWEMEQIGLSPTCEIS 212
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 289 bits (740), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 165/202 (81%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
+ +FGRICVFCGS+ G ++ + DAA+ LG ELV R I+LVYGGGS+GLMGL++Q V DGG
Sbjct: 10 KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEM 134
V+GVIPK LMP E++G +VGEV+ V+DMH+RKAEMAR SDAFIALPGGYGT+EELLE+
Sbjct: 70 RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129
Query: 135 ITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194
ITW+QLGIHDKPVGLLNVDGYY+ LL+ DK EGFI + RQII+SAPTA EL++K+E
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189
Query: 195 QYTRSHQEVAPRTSWEMSELGY 216
+Y+ H+ VA + WE+ + Y
Sbjct: 190 EYSPCHESVATKLCWEIERIDY 211
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 163/226 (72%), Gaps = 24/226 (10%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
+ +F RICVFCGS+ G ++ + DAA+ LG ELVSR I+LVYGGGS+GLMGL++Q V DGG
Sbjct: 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALP------------ 122
V+G+IPK LMP E++G +VGEV+ V+DMH+RKAEMA+ SDAFIALP
Sbjct: 70 RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNML 129
Query: 123 ------------GGYGTMEELLEMITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEG 170
GYGT+EELLE+ITW+QLGIHDKPVGLLNVDGYY+ LL+ DK EG
Sbjct: 130 SWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEG 189
Query: 171 FIKADCRQIIVSAPTAHELLRKMEQYTRSHQEVAPRTSWEMSELGY 216
FI R+IIVSAPTA EL++K+E+Y H+ VA + WEM +GY
Sbjct: 190 FISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGY 235
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 271 bits (692), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 158/203 (77%), Gaps = 1/203 (0%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
+ RF RICVFCGS++G + + +AA+QLG ELV R I+LVYGGGSVGLMGL++Q V GG
Sbjct: 5 KSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGG 64
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEM 134
VLGVIPK LMP EI+G ++GEVK V+DMH+RKAEMARQ+DAFIALPGGYGT+EELLE+
Sbjct: 65 RHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEV 124
Query: 135 ITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194
ITW+QLGIH KPVGLLNVDGYY+ LL DK EGFI R+IIVSAP A EL+R++E
Sbjct: 125 ITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184
Query: 195 QYTRSHQEVAPRTSW-EMSELGY 216
+Y E+ + W E+ + Y
Sbjct: 185 EYEPEFDEITSKLVWDEVDRISY 207
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 270 bits (690), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 152/196 (77%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
+ RF RICVFCGS++GN+ + DAALQL +LV R I+LVYGGGSVGLMGLI+Q V DGG
Sbjct: 5 KSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGG 64
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEM 134
VLG+IPK+L P EI+G S+GEV VS MH+RKAEM RQ+DAFIALPGGYGT EELLE+
Sbjct: 65 RHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEV 124
Query: 135 ITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194
ITWSQLGIH KPVGLLNVDG+YD LL DK EGF+ + R+IIVSAP A +LL+ +E
Sbjct: 125 ITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLLE 184
Query: 195 QYTRSHQEVAPRTSWE 210
+Y H + + W+
Sbjct: 185 EYVPKHDDFVSKMVWD 200
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 256 bits (653), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 149/199 (74%)
Query: 15 RGRFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG 74
+ RF R+CVFCGS++G R + DAA L QELV+R + LVYGGGS+GLMGL++Q V + G
Sbjct: 5 KSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAG 64
Query: 75 CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALPGGYGTMEELLEM 134
VLG+IP+ LM EI+G + GEV V+DMHERKAEMAR SD FIALPGGYGT+EELLE+
Sbjct: 65 GHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEV 124
Query: 135 ITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194
I W+QLGIHDKPVGLLNVDGYY+ LL DK +GFIK R I VSAP A EL++K+E
Sbjct: 125 IAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLE 184
Query: 195 QYTRSHQEVAPRTSWEMSE 213
Y + V ++ WE+ +
Sbjct: 185 AYKPVNDGVIAKSRWEVEK 203
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 221 bits (564), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 138/192 (71%), Gaps = 17/192 (8%)
Query: 17 RFGRICVFCGSNAGNRAVFGDAALQLGQELVSRGIELVYGGGSVGLMGLIAQTVLDGG-- 74
RF ICVFCGS+ GN+A + DAA+ L +ELV R I+LVYGGGS+GLMGL++Q V DGG
Sbjct: 17 RFKSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGRH 76
Query: 75 ------------CGVLGVIPKALMPTEISGASVGEVKIVSDMHERKAEMARQSDAFIALP 122
C + V + ++++G +VGEVK V+DMH+RKA MA+ SDAFI LP
Sbjct: 77 NNNNNGNDDALFCHSVNV---SQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITLP 133
Query: 123 GGYGTMEELLEMITWSQLGIHDKPVGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVS 182
GGYGT+EELLE+ITW+QLGIHDKPVGLLNVDGYYD LL DK EGFI R IIVS
Sbjct: 134 GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIVS 193
Query: 183 APTAHELLRKME 194
APTA EL K+E
Sbjct: 194 APTARELFIKLE 205
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 166 bits (420), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 90 ISGASVGEVKIVSDMHERKAEMARQSDAFIALPGG-YGTMEELLEMITWSQLGIHDKPVG 148
ISG +VGEV+IVSDMHERKA MA+++ AFIAL G Y TMEELLEMITW+QLGIH K VG
Sbjct: 6 ISGETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKTVG 65
Query: 149 LLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKMEQYTRSHQEVAPRTS 208
LLNVDGYY+ LLA FD G EGFIK I+VSAP+A EL+ KME YT SH+ +A S
Sbjct: 66 LLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYTPSHKYIASHQS 125
Query: 209 WEMSELG 215
W++ LG
Sbjct: 126 WKVEPLG 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,927,388
Number of extensions: 200610
Number of successful extensions: 405
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 9
Length of query: 223
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 128
Effective length of database: 8,502,049
Effective search space: 1088262272
Effective search space used: 1088262272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)