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Os01g0706700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF590 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.32 (0.0332) R2 : 0.901
β1 : -2.73 (0.122) R2dD : 0.113 R2D : 0.0769
β2 : 5.36 (0.0902) R2dC : 0.84 R2C : 0.707
β3 : -1.18 (0.102) R2dE : 0.0322 R2E : -0.0546
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.07 (0.0709) R2dN8 : 0.0659 R2N8 : 0.0112
σ : 0.621
deviance : 177.63
__
_____
C
peak time of C : 5.53
E
wheather : temperature
threshold : 19.52
memory length : 76
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23.1
open length of G : 4.12

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
171.6 0.615 7.32 -2.74 5.36 -1.17 1.64 -0.395 -1.06 5.54 19.6 83 23.1 4.17
171.83 0.611 7.31 -2.73 5.36 -1.17 1.55 -- -1.06 5.54 19.5 85 23.1 4.13
177.65 0.621 7.32 -2.72 5.36 -1.19 -- 0.104 -1.06 5.53 19.59 82 23.1 4.08
177.63 0.621 7.32 -2.73 5.36 -1.18 -- -- -1.07 5.53 19.52 76 23.1 4.12
382.76 0.911 7.6 -3.62 -- 3.78 -- -1.03 -1.23 -- 15.14 750 21.3 4.15
208.17 0.676 7.32 -2.83 5.09 -- 1.76 -- -1.09 5.92 -- -- -- --
215.67 0.688 7.32 -2.81 5.1 -- -- -- -1.09 5.89 -- -- -- --
224.35 0.698 7.54 -2.99 -- 4.86 -- -- -1.34 -- 14.2 727 19.2 8.9
239.65 0.721 7.14 -- 5.12 -2.18 -- -- -0.278 5.87 17.54 47520 22.8 3.94
1564.22 1.85 7.4 -2.66 -- -- -- -- -0.975 -- -- -- -- --
424.26 0.964 7.25 -- 5.06 -- -- -- -0.78 5.91 -- -- -- --
412.69 0.946 7.37 -- -- 5.26 -- -- -0.81 -- 12.64 664 19.6 9.63
1750.78 1.95 7.34 -- -- -- -- -- -0.68 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 174.14 temperature 20.0 90 > th dose independent rect. 23 4
3 175.99 temperature 15.0 90 > th dose dependent rect. 23 4
4 176.63 temperature 30.0 90 < th dose independent rect. 3 10
5 176.78 temperature 20.0 270 > th dose independent rect. 23 1
7 177.64 temperature 15.0 270 > th dose dependent rect. 23 1
8 177.85 humidity 80.0 720 < th dose dependent rect. 19 4
9 177.86 humidity 80.0 720 < th dose independent rect. 19 2
14 178.43 temperature 25.0 270 < th dose independent rect. 1 11
18 178.77 temperature 30.0 90 < th dose independent rect. 3 12
22 179.18 precipitation 0.1 270 < th dose independent rect. 24 23
23 179.18 precipitation 0.1 270 < th dose dependent rect. 24 23
29 179.55 temperature 20.0 10 > th dose independent rect. 23 5
33 179.66 radiation 40.0 90 < th dose dependent rect. 12 15
34 179.67 precipitation 0.1 270 < th dose independent rect. 1 21
35 179.67 precipitation 0.1 270 < th dose dependent rect. 1 21
43 179.96 precipitation 0.1 90 < th dose independent rect. 3 20
45 179.96 precipitation 0.1 90 < th dose dependent rect. 3 20
57 180.43 humidity 50.0 720 > th dose dependent rect. 15 10
66 180.73 temperature 30.0 90 < th dose dependent rect. 3 10
68 180.78 humidity 80.0 720 < th dose dependent rect. 18 13
72 180.98 radiation 40.0 90 < th dose independent rect. 13 14
85 181.42 humidity 80.0 90 > th dose independent rect. 23 4
87 181.45 atmosphere 1000.0 90 > th dose independent rect. 23 4
99 181.83 humidity 70.0 90 > th dose dependent rect. 23 4
103 181.91 precipitation 0.1 270 < th dose independent rect. 17 13
104 181.91 precipitation 0.1 270 < th dose dependent rect. 17 13
110 182.07 temperature 25.0 270 < th dose independent sin 6 NA
115 182.17 humidity 70.0 720 > th dose independent rect. 16 9
147 182.77 temperature 30.0 270 < th dose dependent rect. 1 11
171 183.18 humidity 80.0 720 > th dose independent rect. 19 6
176 183.24 radiation 40.0 90 < th dose independent rect. 3 10
177 183.24 radiation 30.0 720 < th dose independent rect. 15 10
182 183.29 temperature 15.0 90 > th dose independent rect. 3 20
195 183.51 temperature 30.0 90 < th dose dependent rect. 3 12
214 183.84 wind 5.0 90 < th dose independent rect. 23 4
215 183.85 humidity 80.0 720 > th dose independent rect. 12 13
226 183.98 wind 9.0 90 < th dose dependent rect. 23 4
231 184.05 radiation 40.0 270 < th dose independent rect. 1 10
234 184.07 temperature 10.0 90 > th dose independent rect. 23 4
235 184.07 temperature 30.0 90 < th dose independent rect. 23 4
236 184.07 humidity 50.0 90 > th dose independent rect. 23 4
240 184.07 radiation 1.0 90 < th dose independent rect. 23 4
246 184.07 radiation 1.0 90 < th dose dependent rect. 23 4
252 184.08 wind 9.0 90 < th dose independent rect. 23 4
253 184.08 precipitation 0.1 90 < th dose independent rect. 3 10
256 184.08 precipitation 0.1 90 < th dose dependent rect. 3 10
259 184.10 atmosphere 995.0 270 > th dose dependent rect. 23 2
270 184.24 atmosphere 1015.0 90 < th dose independent rect. 23 4
275 184.26 precipitation 0.1 90 < th dose independent rect. 23 4
277 184.26 precipitation 0.1 90 < th dose dependent rect. 23 4
284 184.31 atmosphere 995.0 90 > th dose dependent rect. 23 4
293 184.38 precipitation 0.1 720 < th dose independent rect. 11 9
294 184.38 precipitation 0.1 720 < th dose dependent rect. 11 9
304 184.47 precipitation 0.1 720 < th dose independent rect. 17 22
305 184.47 precipitation 0.1 720 < th dose dependent rect. 17 22
312 184.51 precipitation 0.1 720 < th dose independent rect. 18 19
313 184.51 precipitation 0.1 720 < th dose dependent rect. 18 19
323 184.63 humidity 80.0 720 > th dose independent rect. 19 13
344 184.79 radiation 30.0 720 < th dose independent rect. 15 2
351 184.87 temperature 15.0 90 > th dose independent rect. 3 10
357 184.90 temperature 15.0 270 > th dose independent rect. 1 21
358 184.91 wind 9.0 90 < th dose independent rect. 3 20
368 185.06 humidity 50.0 90 > th dose dependent rect. 13 14
372 185.11 wind 9.0 14400 < th dose independent rect. 23 5
376 185.15 humidity 80.0 720 > th dose independent rect. 19 19
386 185.19 temperature 20.0 270 > th dose independent rect. 11 14
396 185.26 precipitation 0.1 90 < th dose independent rect. 3 12
398 185.26 precipitation 0.1 90 < th dose dependent rect. 3 12
408 185.33 precipitation 0.1 720 < th dose independent rect. 10 19
409 185.33 precipitation 0.1 720 < th dose dependent rect. 10 19
417 185.38 atmosphere 1015.0 90 < th dose independent rect. 3 20
429 185.49 humidity 80.0 10 > th dose dependent rect. 7 21
435 185.51 temperature 20.0 90 > th dose independent rect. 13 14
446 185.60 humidity 80.0 30 > th dose independent rect. 12 16
458 185.66 wind 9.0 90 < th dose independent rect. 13 14
468 185.75 precipitation 0.1 720 < th dose independent rect. 1 14
471 185.75 precipitation 0.1 720 < th dose dependent rect. 1 14
508 185.91 precipitation 0.1 720 < th dose independent rect. 18 11
510 185.91 precipitation 0.1 720 < th dose dependent rect. 18 11
520 185.97 atmosphere 995.0 90 > th dose independent rect. 3 10
521 185.97 atmosphere 1015.0 90 < th dose independent rect. 3 10
522 185.97 temperature 10.0 90 > th dose independent rect. 13 14
524 185.97 wind 9.0 90 < th dose dependent rect. 3 10
531 186.04 humidity 70.0 720 > th dose independent rect. 16 2
547 186.11 atmosphere 1015.0 720 < th dose independent rect. 3 10
570 186.26 wind 5.0 270 < th dose independent rect. 23 1
571 186.26 precipitation 0.1 720 < th dose independent rect. 8 15
573 186.26 precipitation 0.1 720 < th dose dependent rect. 8 15
575 186.28 humidity 70.0 720 > th dose independent rect. 15 4
580 186.29 wind 9.0 270 < th dose independent rect. 6 11
585 186.30 humidity 80.0 10 > th dose dependent rect. 11 17
600 186.34 humidity 50.0 10 > th dose dependent rect. 13 15
610 186.39 wind 9.0 90 < th dose independent rect. 3 10
616 186.42 wind 9.0 270 < th dose independent rect. 17 13
621 186.44 atmosphere 995.0 720 > th dose independent rect. 15 2
624 186.44 humidity 50.0 90 > th dose dependent rect. 3 10
628 186.45 radiation 40.0 270 < th dose independent rect. 1 12
634 186.50 atmosphere 1000.0 270 > th dose independent rect. 21 5
643 186.52 precipitation 0.1 270 < th dose independent rect. 1 10
644 186.52 precipitation 0.1 270 < th dose dependent rect. 1 10
649 186.53 wind 9.0 270 < th dose independent rect. 1 21
655 186.55 radiation 10.0 90 < th dose dependent rect. 7 20
666 186.61 atmosphere 995.0 90 > th dose independent rect. 3 20
667 186.61 humidity 50.0 90 > th dose dependent rect. 15 12
670 186.63 wind 9.0 90 < th dose dependent rect. 13 14
694 186.72 temperature 10.0 270 > th dose independent rect. 6 11
695 186.72 atmosphere 1015.0 270 < th dose independent rect. 6 11
696 186.72 temperature 10.0 270 > th dose independent rect. 17 13
697 186.72 radiation 20.0 270 < th dose independent rect. 17 13
705 186.75 humidity 70.0 720 > th dose independent sin 15 NA
718 186.80 precipitation 0.1 720 < th dose independent rect. 17 6
720 186.80 precipitation 0.1 720 < th dose dependent rect. 17 6
721 186.81 atmosphere 1015.0 720 < th dose independent rect. 1 14
771 186.95 temperature 20.0 720 > th dose independent rect. 15 2
773 186.95 temperature 10.0 720 > th dose independent rect. 3 10
774 186.95 atmosphere 995.0 720 > th dose independent rect. 3 10
777 186.95 temperature 10.0 720 > th dose independent rect. 13 14
781 186.97 humidity 80.0 720 > th dose independent sin 17 NA
791 187.03 humidity 80.0 720 > th dose independent sin 10 NA
798 187.05 wind 1.0 4320 < th dose independent rect. 3 3
803 187.06 wind 9.0 90 < th dose dependent rect. 15 12
822 187.11 precipitation 0.1 270 < th dose independent rect. 1 12
824 187.11 temperature 30.0 270 < th dose dependent sin 4 NA
826 187.11 precipitation 0.1 270 < th dose dependent rect. 1 12
832 187.15 radiation 40.0 90 < th dose independent rect. 3 12
842 187.19 humidity 50.0 720 > th dose dependent sin 16 NA
859 187.25 temperature 10.0 720 > th dose independent rect. 15 10
860 187.25 temperature 10.0 720 > th dose independent rect. 1 14
878 187.31 wind 1.0 14400 > th dose independent rect. 3 3
879 187.31 temperature 15.0 90 > th dose independent rect. 3 12
880 187.31 humidity 80.0 10 > th dose independent rect. 7 21
898 187.38 precipitation 0.1 270 < th dose independent rect. 6 10
900 187.38 precipitation 0.1 270 < th dose dependent rect. 6 10
902 187.39 humidity 50.0 720 > th dose dependent rect. 15 4
908 187.41 atmosphere 1015.0 270 < th dose independent rect. 23 1
910 187.41 wind 1.0 14400 < th dose dependent rect. 3 3
917 187.44 wind 1.0 14400 > th dose independent rect. 1 4
920 187.44 atmosphere 995.0 270 > th dose independent rect. 6 10
925 187.46 wind 1.0 14400 < th dose independent rect. 1 4
926 187.47 precipitation 0.1 720 < th dose independent rect. 3 10
928 187.47 precipitation 0.1 720 < th dose dependent rect. 3 10
942 187.52 atmosphere 995.0 30 > th dose dependent rect. 4 19
955 187.53 temperature 15.0 720 > th dose independent rect. 17 22
978 187.59 temperature 10.0 270 > th dose dependent rect. 21 12
990 187.63 radiation 10.0 90 < th dose dependent rect. 9 18
993 187.64 temperature 15.0 720 > th dose independent rect. 3 2