BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0706700 Os01g0706700|AK072738
         (665 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73020.1  | chr1:27469714-27473181 REVERSE LENGTH=666          718   0.0  

>AT1G73020.1 | chr1:27469714-27473181 REVERSE LENGTH=666
          Length = 665

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/641 (57%), Positives = 458/641 (71%), Gaps = 11/641 (1%)

Query: 21  EVGIVVPKLYRGAAAGCGEVENCVARLVRELEDVGLIVERVRGVPAEFIKLSAPMGTLGR 80
           EV +VVPK       G     +CV  LV EL   G++V+RV G+  EF+K++AP   LG 
Sbjct: 13  EVAMVVPKRVLEEEEG-----DCVEVLVTELRKKGMVVDRVVGLAHEFLKVAAPSEILGN 67

Query: 81  VAAEMNMKKLTYIGMELQFEWDQVGAFVRQPDGSLFSWRERFACFRHLIYSIVNKTDSDI 140
            AAE++++K T +G++L FE     AF+RQPDG LFSW ERF C++HLIY IVN    D+
Sbjct: 68  AAAELHIRKPTRLGIDLPFEMQGSEAFIRQPDGLLFSWFERFRCYQHLIYGIVNSGGHDV 127

Query: 141 TLSFDDKEFHWTQNESLLTRLEDEGIVKLVFPLHDEIKRKQLLRSWALKWFDFTWQPIDE 200
           TL  D +EF WT  ESLL RLE EG++K +FPLHDE+KRK+LL++WAL W++ T QPID+
Sbjct: 128 TLKLDGREFCWTAGESLLRRLESEGVIKQMFPLHDELKRKELLQNWALNWWNCTNQPIDQ 187

Query: 201 IYSYFGTKIAIYFSFLGMYTRWLFFPAVFGLATQLIDFGSLQWLVLPXXXXXXXXXXXXX 260
           IYSYFG KI +YFSFLGMYT+WL FPA+ G   Q++DFGSLQ+L LP             
Sbjct: 188 IYSYFGAKIGVYFSFLGMYTQWLIFPALLGFIVQMVDFGSLQFLALPSFFVGTILWAALF 247

Query: 261 LQFWKRKNSAVLARWGINYSFSE---YKTMGNELDPLSFSMADDNVQQRKFGAPKEKSIV 317
           LQFWKRKN+A+LARW IN        Y+ +G E   L F    + ++       KEK   
Sbjct: 248 LQFWKRKNAALLARWQINCLVGPSQGYRFLGMEWSSLPF--PKELIKNLGNERAKEKEAY 305

Query: 318 QRNEWFGVLLRIRNNAIIVLAIICLQLPFELAYAHLYAITKTEALRYVLTAVYLAAIQYY 377
           QR EWF    R RN+ +++++IICLQLPFELAYAH++ I  ++ ++YVLTA+YL  IQY 
Sbjct: 306 QRYEWFAYRKRFRNDVLVIMSIICLQLPFELAYAHIFEIITSDIIKYVLTAIYLLIIQYL 365

Query: 378 TRIGGKVSVTLIKYENNQGEQSSADSLVYKVFGLYFMQSYIGLFYHASLHRNIMALRQVL 437
           TR+GGKVSV LI  E N+  +  A+SL+YKVFGLYFMQ+YIG+FYH  LHRN M LRQVL
Sbjct: 366 TRLGGKVSVKLINREINESVEYRANSLIYKVFGLYFMQTYIGIFYHVLLHRNFMTLRQVL 425

Query: 438 IKRLIVSQVLENLIENSIPYLNYSYKKYRAVHKKKHEKESPAGKSVRLSTRVEKEYLKPS 497
           I+RLI+SQV   L++ S+PYL YSY+KYRA  KKK E  S  GK +++++RVEKEY KP+
Sbjct: 426 IQRLIISQVFWTLMDGSLPYLKYSYRKYRARTKKKMEDGSSTGK-IQIASRVEKEYFKPT 484

Query: 498 YTASIXXXXXXXXXXXXXXXTLQFGMIMMFACAFPSIFCFAALNNVTEIRADALKLLVML 557
           Y+ASI                LQFGMIMMFACAFP  F  AA++NV EIR +ALKLLV L
Sbjct: 485 YSASIGVELEDGLFDDSLELALQFGMIMMFACAFPLAFALAAVSNVMEIRTNALKLLVTL 544

Query: 558 KRPAPRDAATIGAWLNIFQFLVVMAICTNCLLLVCLYDEEGKWKIEPGLAAILIMEHALF 617
           +RP PR AATIGAWLNI+QFLVVM+ICTN  LLVCLYD+EGKWKIEPGLAAILIMEH L 
Sbjct: 545 RRPLPRAAATIGAWLNIWQFLVVMSICTNSALLVCLYDQEGKWKIEPGLAAILIMEHVLL 604

Query: 618 LIKFGFSHFVPEEPAWVKANRGRYVAQAQNVCSKQLLRSIA 658
           L+KFG S  VPEEPAWV+A+R + V QAQ++  KQLLRSI+
Sbjct: 605 LLKFGLSRLVPEEPAWVRASRVKNVTQAQDMYCKQLLRSIS 645



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.139    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,977,093
Number of extensions: 519469
Number of successful extensions: 1514
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1511
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 560
Effective length of database: 8,227,889
Effective search space: 4607617840
Effective search space used: 4607617840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 115 (48.9 bits)