Os01g0703600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mu1 adaptin.
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Os01g0703600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mu1 adaptin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15 | 0.182 | 12 | 0.121 | 0.585 | -0.166 | 0.0587 | -1.71 | 0.32 | 23.4 | 9.199 | 11438 | -- | -- |
| 17.75 | 0.198 | 11.9 | 0.474 | 0.589 | 0.0399 | 0.0538 | -- | 0.419 | 23.4 | 9.199 | 11438 | -- | -- |
| 15.01 | 0.18 | 12 | 0.118 | 0.586 | -0.164 | -- | -1.71 | 0.319 | 23.4 | 9.251 | 11399 | -- | -- |
| 17.76 | 0.198 | 11.9 | 0.472 | 0.588 | 0.0391 | -- | -- | 0.419 | 23.4 | 8.386 | 47520 | -- | -- |
| 34.53 | 0.275 | 11.9 | 0.469 | -- | -0.491 | -- | -0.859 | 0.465 | -- | 12.08 | 18920 | -- | -- |
| 17.77 | 0.198 | 11.9 | 0.482 | 0.58 | -- | 0.0516 | -- | 0.425 | 23.4 | -- | -- | -- | -- |
| 17.78 | 0.197 | 11.9 | 0.48 | 0.58 | -- | -- | -- | 0.425 | 23.4 | -- | -- | -- | -- |
| 35.09 | 0.277 | 11.9 | 0.588 | -- | -0.491 | -- | -- | 0.499 | -- | 15.37 | 36203 | -- | -- |
| 19.56 | 0.206 | 12 | -- | 0.575 | 0.333 | -- | -- | 0.272 | 23.4 | 7.158 | 47520 | -- | -- |
| 38.88 | 0.291 | 11.9 | 0.495 | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
| 23.85 | 0.228 | 11.9 | -- | 0.585 | -- | -- | -- | 0.371 | 23.5 | -- | -- | -- | -- |
| 40.1 | 0.295 | 12 | -- | -- | 0.369 | -- | -- | 0.266 | -- | 8.893 | 46983 | -- | -- |
| 45.34 | 0.314 | 11.9 | -- | -- | -- | -- | -- | 0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.27 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 14.31 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 3 | 14.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 4 | 14.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 6 | 14.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 7 | 14.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 8 | 14.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 26 | 14.61 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 35 | 14.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 39 | 14.82 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 41 | 14.86 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 42 | 14.86 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 51 | 14.89 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 52 | 14.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 53 | 14.90 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 66 | 14.91 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 69 | 14.92 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 70 | 14.92 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 71 | 14.92 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 82 | 14.93 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 83 | 14.93 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 104 | 14.94 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 106 | 14.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 114 | 14.94 | wind | 3.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 126 | 14.95 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 127 | 14.95 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 129 | 14.95 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 175 | 14.96 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 181 | 14.96 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 23 | 11 |
| 192 | 14.97 | temperature | 20.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 227 | 14.98 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 235 | 14.98 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 251 | 14.99 | temperature | 20.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 281 | 14.99 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 314 | 15.00 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 399 | 15.02 | wind | 5.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 437 | 15.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 525 | 15.04 | wind | 5.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 529 | 15.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 564 | 15.04 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 594 | 15.04 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 604 | 15.05 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 675 | 15.06 | wind | 5.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 766 | 15.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 823 | 15.07 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 843 | 15.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 890 | 15.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 892 | 15.08 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 896 | 15.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |