BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0703600 Os01g0703600|AK065538
(429 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60780.1 | chr1:22369289-22371885 REVERSE LENGTH=429 793 0.0
AT1G10730.1 | chr1:3565463-3567779 FORWARD LENGTH=429 753 0.0
AT5G46630.2 | chr5:18920580-18923060 FORWARD LENGTH=442 323 9e-89
AT4G24550.2 | chr4:12675873-12678903 FORWARD LENGTH=452 262 3e-70
AT1G56590.1 | chr1:21202250-21204697 REVERSE LENGTH=416 169 3e-42
>AT1G60780.1 | chr1:22369289-22371885 REVERSE LENGTH=429
Length = 428
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/429 (86%), Positives = 406/429 (94%), Gaps = 1/429 (0%)
Query: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
MAGA SALFLLDIKGRVLVWRDYRGDVSA QAERFFTKL++KEGDS+++ PV YD+ GVT
Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYDN-GVT 59
Query: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
YMF+QH+NV+L+ ASRQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE
Sbjct: 60 YMFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 119
Query: 121 MMDFGYPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVE 180
MMDFGYPQYTEA+ILSEFIKTDAYRMEV+QRPPMAVTNAVSWRSEGI+YKKNEVFLDV+E
Sbjct: 120 MMDFGYPQYTEARILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFLDVIE 179
Query: 181 SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDLDDI 240
+VNILVNSNGQIVRSDVVGALKMRTYL+GMPECKLGLNDRVLLEAQGRATKGKAIDL+DI
Sbjct: 180 NVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDI 239
Query: 241 KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSRSRIELMVK 300
KFHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQIE HSRSR+E+++K
Sbjct: 240 KFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQIESHSRSRVEMLIK 299
Query: 301 ARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFPGGKDYMC 360
ARSQFKERSTATNVEIE+PVP+DA+NP +RTS+GSA+YAPE+DA+VWK+KSFPG K+YM
Sbjct: 300 ARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPEKDALVWKIKSFPGNKEYML 359
Query: 361 RAEFSLPSITXXXXXXXXXXXIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM 420
RAEF LPSIT IRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM
Sbjct: 360 RAEFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM 419
Query: 421 AGEYELRLI 429
AGEYELRL+
Sbjct: 420 AGEYELRLV 428
>AT1G10730.1 | chr1:3565463-3567779 FORWARD LENGTH=429
Length = 428
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/429 (82%), Positives = 396/429 (92%), Gaps = 1/429 (0%)
Query: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
MAGA SALFLLDIKGRVLVWRDYRGDV+A QAERFFTKL++ EGDS+++ PV YD+ GVT
Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDN-GVT 59
Query: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
YMF+QH+N++L+ ASRQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE
Sbjct: 60 YMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 119
Query: 121 MMDFGYPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVE 180
MMDFGYPQ+TEA+ILSEFIKTDAYRMEV+QRPPMAVTN+VSWRSEG+++KKNEVFLDV+E
Sbjct: 120 MMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIE 179
Query: 181 SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDLDDI 240
SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDR+LLEAQGRA KGKAIDL+DI
Sbjct: 180 SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDI 239
Query: 241 KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSRSRIELMVK 300
KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEA IE+HSRSR+E++VK
Sbjct: 240 KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVK 299
Query: 301 ARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFPGGKDYMC 360
ARSQFK+RS AT+VEIE+PVP+DA NP++RTS+GSAAYAPE+DA+VWK++ F G K++
Sbjct: 300 ARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTL 359
Query: 361 RAEFSLPSITXXXXXXXXXXXIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM 420
+A+F LPSI IRVKFEIP F VSGIQVRYLKIIEKSGYQA PWVRYITM
Sbjct: 360 KADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITM 419
Query: 421 AGEYELRLI 429
AGEYELRL+
Sbjct: 420 AGEYELRLM 428
>AT5G46630.2 | chr5:18920580-18923060 FORWARD LENGTH=442
Length = 441
Score = 323 bits (829), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 251/417 (60%), Gaps = 18/417 (4%)
Query: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
M A SA++ L+++G VL+ R YR DV + F T ++ + E + V G +
Sbjct: 1 MPVAASAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTK---ELGNCPVRQIGGCS 57
Query: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFE-ELEEESLRDNFVVVYELLD 119
+++++ +NV+++ N N A F+ V +FK YF +E+++R+NFV++YELLD
Sbjct: 58 FVYMRISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLD 117
Query: 120 EMMDFGYPQYTEAKILSEFIKTDAYRMEVSQRP--------PMAVTNAVSWRSEGIRYKK 171
E+MDFGYPQ +IL +I + R S +P + VT AV WR EG+ YKK
Sbjct: 118 EIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPKDKPVPNATLQVTGAVGWRREGLAYKK 177
Query: 172 NEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGR--- 228
NEVFLD+VESVN+L++S G ++R DV G + M+ +LSGMP+ KLGLND++ LE +
Sbjct: 178 NEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESEMKS 237
Query: 229 --ATKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQ 286
A GK I+LDD+ FHQCV L RF +++T+SF+PPDG F+LM YR++ V V
Sbjct: 238 RPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPT 297
Query: 287 IEKHSRSRIELMVKARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMV 346
I++ R+R+E+ VK +S F + A V +++PVP N + + G A Y P D +V
Sbjct: 298 IKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTGRAKYNPSIDCLV 357
Query: 347 WKVKSFPGGKDYMCRAEFSLPSITXXXXXXXXXXXIRVKFEIPYFTVSGIQVRYLKI 403
WK++ FPG + AE L S T I+++F++P FT SG++VR+LK+
Sbjct: 358 WKIRKFPGQTESTLSAEIELIS-TMGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKV 413
>AT4G24550.2 | chr4:12675873-12678903 FORWARD LENGTH=452
Length = 451
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 242/451 (53%), Gaps = 29/451 (6%)
Query: 5 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFI 64
+S F+L +G +V+RDYR +V E FF K+ + D A +P +++ GV Y +
Sbjct: 3 ISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFHV 62
Query: 65 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 124
+ ++ + +R N + + +L L R+ V K Y L E+S R NFV+VYELLDE++DF
Sbjct: 63 KVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDF 122
Query: 125 GYPQYTEAKILSEFIKTDA----------------YRMEVSQRPPMAVTNAVSWRSEGIR 168
GY Q T ++L +I + + + P AVT +V G R
Sbjct: 123 GYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGGR 182
Query: 169 YKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQG- 227
++ E+F+D++E +++ +S+G I+ S++ G ++M++YLSG PE +L LN+ + + G
Sbjct: 183 -RREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241
Query: 228 -----RATKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 282
R++ G + LDD FH+ VRL F++DRT+S +PPDG F +M YR++ + KP
Sbjct: 242 SVYDYRSSSGSGVILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPFH 301
Query: 283 VEAQIEKHSRSRIELMVKARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAA----Y 338
V IE+ R + E+++K R++F A + +++P+P+ + + G+A +
Sbjct: 302 VNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDF 361
Query: 339 APERDAMVWKVKSFPGGKDYMCRAEFSLPSITXXXXXXXXXXXIRVKFEIPYFTVSGIQV 398
+ W +K GG ++ RA+ + S + + F IP + VS +QV
Sbjct: 362 KESNKMLEWNLKKIVGGGEHTLRAKLTF-SQEFHGNITKEAGPVSMTFTIPMYNVSKLQV 420
Query: 399 RYLKIIEK-SGYQALPWVRYITMAGEYELRL 428
+YL+I +K S Y WVRY+T A Y R+
Sbjct: 421 KYLQIAKKSSSYNPYRWVRYVTQANSYVARI 451
>AT1G56590.1 | chr1:21202250-21204697 REVERSE LENGTH=416
Length = 415
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 204/443 (46%), Gaps = 48/443 (10%)
Query: 5 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMF- 63
+ +FL+ G V++ + G +F +GDS PV+ + Y+F
Sbjct: 2 LQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIA--SPTHYLFQ 59
Query: 64 IQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMD 123
I + + L S+ + FL RV DV Y L E+ ++DNF++VYELLDEM+D
Sbjct: 60 IVRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMID 119
Query: 124 FGYPQYTEAKILSEFIK-----------TDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKN 172
G+P TE IL E I VS P + V WR +Y N
Sbjct: 120 NGFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNVSDTLPSGAGSCVPWRPTDPKYSSN 179
Query: 173 EVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKG 232
EV++D+VE ++ +VN +G++V+ ++ G ++M + L+G P+ L + +LE
Sbjct: 180 EVYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTLSFANPSILE-------- 231
Query: 233 KAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSR 292
D++FH CVR +E+ + +SF+PPDG F LM+YR+ ++V+ QI S
Sbjct: 232 ------DMRFHPCVRYRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPVYVKPQITSDSG 285
Query: 293 S-RIELMVKARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKS 351
+ RI ++V RS T ++ + +P ++ ++ ++ G+ + W +
Sbjct: 286 TCRISVLVGIRSD--PGKTIESITLSFQLPHCVSSADLSSNHGTVTILSNKTC-TWTIGR 342
Query: 352 FPGGKDYMCRAEFSL-PSITXXXXXXXXXXXIRVKFEIPYFTVSGIQVRYLKIIEKSGYQ 410
P K +L P + ++ F+I +SG++ IEK Q
Sbjct: 343 IPKDKTPCLSGTLALEPGL----ERLHVFPTFKLGFKIMGIALSGLR------IEKLDLQ 392
Query: 411 ALP-----WVRYITMAGEYELRL 428
+P R T AGE+++RL
Sbjct: 393 TIPPRLYKGFRAQTRAGEFDVRL 415
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,710,342
Number of extensions: 343085
Number of successful extensions: 784
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 771
Number of HSP's successfully gapped: 5
Length of query: 429
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 328
Effective length of database: 8,337,553
Effective search space: 2734717384
Effective search space used: 2734717384
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)