Os01g0691100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipid transfer protein (Fragment).
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Os01g0691100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lipid transfer protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.71 | 0.597 | 4.29 | 0.697 | 0.792 | -0.0606 | 0.53 | -3.38 | 0.769 | 3.12 | 1007 | 5760 | -- | -- |
| 166.75 | 0.601 | 4.28 | 0.854 | 0.778 | -0.425 | 0.528 | -- | 0.682 | 3.15 | 1001 | 18532 | -- | -- |
| 162.56 | 0.594 | 4.29 | 0.694 | 0.802 | -0.0528 | -- | -3.36 | 0.776 | 3.23 | 1007 | 5776 | -- | -- |
| 167.35 | 0.603 | 4.28 | 0.852 | 0.777 | -0.43 | -- | -- | 0.697 | 3.35 | 1001 | 18572 | -- | -- |
| 198.46 | 0.656 | 4.29 | 0.741 | -- | -0.12 | -- | -3.09 | 0.778 | -- | 1007 | 5740 | -- | -- |
| 173.78 | 0.618 | 4.25 | 0.826 | 0.783 | -- | 0.493 | -- | 0.794 | 3.16 | -- | -- | -- | -- |
| 174.49 | 0.619 | 4.25 | 0.816 | 0.79 | -- | -- | -- | 0.791 | 3.34 | -- | -- | -- | -- |
| 200.64 | 0.66 | 4.27 | 0.977 | -- | -0.609 | -- | -- | 0.753 | -- | 1001 | 12389 | -- | -- |
| 186.26 | 0.636 | 4.3 | -- | 0.796 | -0.394 | -- | -- | 0.603 | 3.33 | 1002 | 18376 | -- | -- |
| 209.68 | 0.677 | 4.25 | 0.85 | -- | -- | -- | -- | 0.812 | -- | -- | -- | -- | -- |
| 192.05 | 0.648 | 4.28 | -- | 0.806 | -- | -- | -- | 0.7 | 3.34 | -- | -- | -- | -- |
| 221.91 | 0.694 | 4.3 | -- | -- | -0.434 | -- | -- | 0.611 | -- | 1003 | 18332 | -- | -- |
| 228.72 | 0.706 | 4.28 | -- | -- | -- | -- | -- | 0.717 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.98 | humidity | 80 | 10 | < th | dose independent | rect. | 21 | 18 |
| 9 | 158.63 | humidity | 80 | 10 | < th | dose independent | sin | 6 | NA |
| 14 | 158.86 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 17 |
| 34 | 159.65 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 36 | 159.86 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 40 | 159.94 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 42 | 160.00 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 7 |
| 46 | 160.11 | wind | 7 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 47 | 160.12 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 54 | 160.26 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 56 | 160.26 | wind | 5 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 57 | 160.27 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 63 | 160.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 68 | 160.33 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 8 |
| 75 | 160.37 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 81 | 160.40 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 93 | 160.45 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 95 | 160.46 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 137 | 160.57 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 160 | 160.66 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 195 | 160.79 | humidity | 80 | 30 | > th | dose independent | sin | 7 | NA |
| 215 | 160.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 239 | 160.90 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 243 | 160.92 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 9 | NA |
| 273 | 161.00 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 275 | 161.00 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 21 |
| 295 | 161.05 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 21 | 18 |
| 315 | 161.10 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 9 | NA |
| 345 | 161.14 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 375 | 161.22 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 380 | 161.23 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 384 | 161.25 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 398 | 161.28 | wind | 5 | 4320 | > th | dose dependent | sin | 13 | NA |
| 433 | 161.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 449 | 161.39 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 477 | 161.48 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 15 |
| 497 | 161.53 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 511 | 161.53 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 546 | 161.56 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 605 | 161.63 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 651 | 161.69 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 662 | 161.71 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 674 | 161.72 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 687 | 161.73 | atmosphere | 995 | 14400 | > th | dose independent | sin | 6 | NA |
| 757 | 161.77 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 770 | 161.79 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 7 |
| 788 | 161.81 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 3 | NA |
| 792 | 161.82 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 815 | 161.83 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 827 | 161.85 | wind | 5 | 4320 | > th | dose independent | sin | 13 | NA |
| 829 | 161.85 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 857 | 161.88 | atmosphere | 995 | 14400 | < th | dose independent | sin | 6 | NA |
| 858 | 161.88 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 875 | 161.90 | humidity | 80 | 90 | > th | dose independent | rect. | 23 | 11 |
| 881 | 161.91 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 995 | 162.00 | wind | 7 | 14400 | < th | dose independent | rect. | 6 | 1 |