BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0691100 Os01g0691100|AK064045
(103 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18280.1 | chr3:6267102-6267392 FORWARD LENGTH=97 77 2e-15
AT1G48750.1 | chr1:18036019-18036303 FORWARD LENGTH=95 74 2e-14
AT1G66850.1 | chr1:24936985-24937293 FORWARD LENGTH=103 72 5e-14
AT1G73780.1 | chr1:27743872-27744168 FORWARD LENGTH=99 71 1e-13
AT5G38170.1 | chr5:15227717-15228028 FORWARD LENGTH=104 66 3e-12
AT5G38160.1 | chr5:15225836-15226147 FORWARD LENGTH=104 62 6e-11
AT2G14846.1 | chr2:6382430-6382729 FORWARD LENGTH=100 60 3e-10
AT1G43667.1 | chr1:16465170-16465466 REVERSE LENGTH=99 60 3e-10
AT5G38195.1 | chr5:15246991-15247278 FORWARD LENGTH=96 59 4e-10
AT3G57310.1 | chr3:21208200-21208511 REVERSE LENGTH=104 57 1e-09
AT5G38180.1 | chr5:15229856-15230143 FORWARD LENGTH=96 57 2e-09
AT1G43666.1 | chr1:16461181-16461471 REVERSE LENGTH=97 55 6e-09
AT1G43665.1 | chr1:16452981-16453804 REVERSE LENGTH=124 55 8e-09
AT1G07747.1 | chr1:2403558-2403845 FORWARD LENGTH=96 51 1e-07
AT5G38197.1 | chr5:15251024-15251314 FORWARD LENGTH=97 46 5e-06
>AT3G18280.1 | chr3:6267102-6267392 FORWARD LENGTH=97
Length = 96
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 APAA-ATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNS 89
APAA A C P+ L PCA AI PS CCA L+ Q+ CLC Y +NP LR+++++ N+
Sbjct: 23 APAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNA 82
Query: 90 RKVAAACSVPAPRC 103
RKV+ +C +P PRC
Sbjct: 83 RKVSKSCKLPIPRC 96
>AT1G48750.1 | chr1:18036019-18036303 FORWARD LENGTH=95
Length = 94
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 33 AAATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKV 92
A C P+ L CAAA+ PS ACC LR Q+ CLC Y +NP LR+Y++S N+RKV
Sbjct: 24 AEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMRNPTLRQYVSSPNARKV 83
Query: 93 AAACSVPAPRC 103
+ +C +P+P C
Sbjct: 84 SNSCKIPSPSC 94
>AT1G66850.1 | chr1:24936985-24937293 FORWARD LENGTH=103
Length = 102
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 43/70 (61%)
Query: 34 AATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVA 93
CD L+PC AAI G PS ACCA L Q+ CLC +AKNP +YI+S N+RKV
Sbjct: 33 VGVTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVL 92
Query: 94 AACSVPAPRC 103
AC+V P C
Sbjct: 93 LACNVAYPTC 102
>AT1G73780.1 | chr1:27743872-27744168 FORWARD LENGTH=99
Length = 98
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 33 AAATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKV 92
AA C+P L PC I+ G PS CC+ ++ Q+ C+C+Y KNP+ + ++NS N++ +
Sbjct: 28 AAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNFKSFLNSPNAKII 87
Query: 93 AAACSVPAPRC 103
A C P P+C
Sbjct: 88 ATDCHCPYPKC 98
>AT5G38170.1 | chr5:15227717-15228028 FORWARD LENGTH=104
Length = 103
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 34 AATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVA 93
A CD + L CA +L G PST CC L+ Q+ C C Y K+P +Y+ S N++K
Sbjct: 34 ADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTL 93
Query: 94 AACSVPAPRC 103
A C VP P C
Sbjct: 94 ATCGVPYPTC 103
>AT5G38160.1 | chr5:15225836-15226147 FORWARD LENGTH=104
Length = 103
Score = 62.0 bits (149), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%)
Query: 38 CDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACS 97
CD L C A+ G PST CC L+ + CLC Y +NP Y+ S N+RK AAC
Sbjct: 38 CDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACD 97
Query: 98 VPAPRC 103
V P C
Sbjct: 98 VAYPTC 103
>AT2G14846.1 | chr2:6382430-6382729 FORWARD LENGTH=100
Length = 99
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 43 LRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACSVPAPR 102
LR C A+ G PS CC L+ Q CLC Y K P +Y++S ++KV AC++P P+
Sbjct: 39 LRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPK 98
Query: 103 C 103
C
Sbjct: 99 C 99
>AT1G43667.1 | chr1:16465170-16465466 REVERSE LENGTH=99
Length = 98
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 38 CDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACS 97
C L+PC +++ G PST CC L+ Q C C Y +NP +YI + ++++ AAC
Sbjct: 35 CTVTELQPCLPSVIDGSQPSTQCCEKLKEQNSCFCDYLQNPQFSQYITA--AKQILAACK 92
Query: 98 VPAPRC 103
+P P C
Sbjct: 93 IPYPNC 98
>AT5G38195.1 | chr5:15246991-15247278 FORWARD LENGTH=96
Length = 95
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 34 AATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVA 93
++ C P L PC A+ G P+ CC L QK CLC Y NP +++S +RKV
Sbjct: 26 VSSSCIPTELMPCLPAMTTGGQPTKDCCDKLIEQKECLCGYINNPLYSTFVSSPVARKVL 85
Query: 94 AACSVPAPRC 103
C++P P C
Sbjct: 86 EVCNIPYPSC 95
>AT3G57310.1 | chr3:21208200-21208511 REVERSE LENGTH=104
Length = 103
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 23 TVCGASRTAPAAATKCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRK 82
TV G AA C L C AIL G P CC L+ Q+ CLC Y K+P
Sbjct: 25 TVVGGWGIEEKAA--CIVTNLMSCLPAILKGSQPPAYCCEMLKEQQSCLCGYIKSPTFGH 82
Query: 83 YINSQNSRKVAAACSVPAPRC 103
Y+ QN+ K+ AAC + P+C
Sbjct: 83 YVIPQNAHKLLAACGILYPKC 103
>AT5G38180.1 | chr5:15229856-15230143 FORWARD LENGTH=96
Length = 95
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 34/66 (51%)
Query: 38 CDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACS 97
C P+ L PC A+ E P+ CC L QK CLC Y KNP + S +RKV C+
Sbjct: 30 CVPMELMPCLPAMTKREQPTKDCCENLIKQKTCLCDYIKNPLYSMFTISLVARKVLETCN 89
Query: 98 VPAPRC 103
VP C
Sbjct: 90 VPYTSC 95
>AT1G43666.1 | chr1:16461181-16461471 REVERSE LENGTH=97
Length = 96
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 38 CDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACS 97
CD + C I+ G PS CC L+ Q+ CLC Y +P + +YI N+++V AC
Sbjct: 32 CDFTKFQVCKPEIITGSPPSEECCEKLKEQQSCLCAYLISPSISQYIG--NAKRVIRACG 89
Query: 98 VPAPRC 103
+P P C
Sbjct: 90 IPFPNC 95
>AT1G43665.1 | chr1:16452981-16453804 REVERSE LENGTH=124
Length = 123
Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 43 LRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACSVPAPR 102
L+ C +A+ PS CC L+ QK CLC Y +NP + KY+ + +RKV AAC +P PR
Sbjct: 39 LQVCLSALETPIPPSAECCKNLKIQKSCLCDYMENPSIEKYL--EPARKVFAACGMPYPR 96
>AT1G07747.1 | chr1:2403558-2403845 FORWARD LENGTH=96
Length = 95
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 43 LRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACSVPAPR 102
L+ C I+ PST CC L+ +K C C Y KNP + Y+ S +++V AC VP P
Sbjct: 34 LKACLPDIIGETPPSTKCCTKLKDKKSCFCEYLKNPLIAPYMTS--AKQVLEACGVPVPV 91
Query: 103 C 103
C
Sbjct: 92 C 92
>AT5G38197.1 | chr5:15251024-15251314 FORWARD LENGTH=97
Length = 96
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 46 CAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAACSVPAPRC 103
C A+ G P+ CC L QK LC Y NP + S +RKV C++P P C
Sbjct: 39 CLPAMTTGGQPTKDCCNTLIGQKESLCGYITNPLYYLFFTSPAARKVLEVCNIPYPTC 96
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.128 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,968,704
Number of extensions: 61945
Number of successful extensions: 138
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 16
Length of query: 103
Length of database: 11,106,569
Length adjustment: 73
Effective length of query: 30
Effective length of database: 9,105,201
Effective search space: 273156030
Effective search space used: 273156030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 104 (44.7 bits)