Os01g0687300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0687300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.18 | 0.441 | 11.6 | -1.02 | 4.07 | -3.63 | 0.199 | -0.859 | -0.467 | 0.263 | 6.361 | 250 | 9.81 | -- |
| 88.01 | 0.437 | 11.7 | -1.05 | 3.99 | -3.57 | -0.343 | -- | -0.522 | 0.166 | 4.548 | 219 | 9.76 | -- |
| 88.03 | 0.437 | 11.6 | -1.03 | 4.08 | -3.64 | -- | -0.69 | -0.471 | 0.276 | 6.091 | 245 | 9.74 | -- |
| 88.83 | 0.439 | 11.6 | -1.07 | 4.03 | -3.55 | -- | -- | -0.485 | 0.209 | 3.759 | 208 | 9.49 | -- |
| 174.07 | 0.614 | 11.5 | -0.806 | -- | -1.26 | -- | 1.09 | -0.407 | -- | 32.47 | 4219 | 5.46 | -- |
| 178.02 | 0.626 | 11.6 | -0.952 | 0.623 | -- | -0.553 | -- | -0.352 | 1.28 | -- | -- | -- | -- |
| 179.28 | 0.627 | 11.5 | -0.933 | 0.624 | -- | -- | -- | -0.349 | 1.32 | -- | -- | -- | -- |
| 165.89 | 0.6 | 11.5 | -0.875 | -- | -1.31 | -- | -- | -0.343 | -- | 156 | 4270 | 4.23 | -- |
| 117.87 | 0.506 | 11.6 | -- | 4.14 | -3.6 | -- | -- | -0.363 | 0.257 | 6.476 | 213 | 9.19 | -- |
| 203.28 | 0.666 | 11.5 | -0.908 | -- | -- | -- | -- | -0.336 | -- | -- | -- | -- | -- |
| 202.21 | 0.665 | 11.5 | -- | 0.608 | -- | -- | -- | -0.245 | 1.26 | -- | -- | -- | -- |
| 183.13 | 0.63 | 11.5 | -- | -- | -1.49 | -- | -- | -0.315 | -- | 148.3 | 4292 | 5.56 | -- |
| 225.04 | 0.7 | 11.5 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.23 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 2 | 88.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 2 |
| 9 | 90.19 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 10 | 90.28 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 21 | 90.44 | radiation | 10.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 31 | 92.49 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 33 | 92.97 | radiation | 1.0 | 270 | < th | dose dependent | sin | 18 | NA |
| 45 | 93.03 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 49 | 93.10 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 19 |
| 50 | 93.18 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 5 |
| 51 | 93.18 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 53 | 93.45 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 56 | 93.64 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 57 | 93.65 | wind | 1.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 58 | 93.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 59 | 93.79 | radiation | 40.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 60 | 93.88 | temperature | 10.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 62 | 93.88 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 64 | 93.88 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 65 | 93.88 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 68 | 94.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 75 | 94.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 77 | 94.54 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 87 | 95.40 | humidity | 90.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 96 | 96.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 98 | 96.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 103 | 96.60 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 107 | 96.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 108 | 96.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 2 |
| 110 | 96.77 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 2 |
| 113 | 96.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 119 | 96.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 129 | 96.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 2 |
| 131 | 96.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 134 | 97.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 13 |
| 143 | 97.28 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 19 |
| 144 | 97.28 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 156 | 97.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 169 | 98.07 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 217 | 99.14 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 221 | 99.30 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 230 | 99.45 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 264 | 99.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 266 | 99.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 270 | 99.91 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 18 |
| 272 | 99.91 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 273 | 99.93 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 294 | 100.29 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 324 | 100.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 340 | 100.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 343 | 100.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 348 | 100.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 20 |
| 349 | 100.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 386 | 101.44 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 387 | 101.44 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 388 | 101.44 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 390 | 101.44 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 391 | 101.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 396 | 101.44 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 397 | 101.44 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 398 | 101.44 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 403 | 101.47 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 427 | 101.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 431 | 102.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 435 | 102.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 436 | 102.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 472 | 102.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 484 | 102.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 485 | 102.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 503 | 103.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 504 | 103.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 508 | 103.14 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 531 | 103.34 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 543 | 103.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 547 | 103.70 | radiation | 1.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 552 | 103.84 | humidity | 90.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 555 | 103.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 569 | 104.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 6 |
| 570 | 104.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 576 | 104.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 577 | 104.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 580 | 104.26 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 582 | 104.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 583 | 104.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 584 | 104.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 597 | 104.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 598 | 104.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 618 | 104.83 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 7 |
| 632 | 105.07 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 656 | 105.16 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 669 | 105.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 2 |
| 684 | 105.78 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 19 |
| 727 | 106.23 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 762 | 106.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 810 | 107.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 818 | 107.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 858 | 107.27 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 893 | 107.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 896 | 107.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 900 | 107.58 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 906 | 107.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 907 | 107.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 927 | 107.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 933 | 107.61 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 960 | 107.82 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 6 |
| 1000 | 108.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 20 |