Os01g0672100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os01g0672100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.6 | 0.816 | 7.41 | -4.11 | 0.713 | -0.647 | 1.26 | -4.16 | -0.979 | 3.88 | 1004 | 5022 | -- | -- |
| 321.04 | 0.834 | 7.37 | -4.01 | 0.768 | -0.602 | 1.18 | -- | -1.01 | 3.95 | 1003 | 12965 | -- | -- |
| 306.26 | 0.815 | 7.41 | -4.12 | 0.719 | -0.652 | -- | -4.07 | -0.987 | 3.86 | 1004 | 5026 | -- | -- |
| 322.54 | 0.836 | 7.36 | -3.94 | 0.766 | -0.879 | -- | -- | -1.01 | 4 | 1003 | 12329 | -- | -- |
| 334.69 | 0.852 | 7.41 | -4.09 | -- | -0.674 | -- | -4.04 | -0.968 | -- | 1004 | 5026 | -- | -- |
| 337.39 | 0.861 | 7.35 | -4.03 | 0.722 | -- | 1.17 | -- | -0.881 | 3.95 | -- | -- | -- | -- |
| 341.33 | 0.865 | 7.36 | -4.05 | 0.728 | -- | -- | -- | -0.888 | 3.92 | -- | -- | -- | -- |
| 348.48 | 0.869 | 7.39 | -3.89 | -- | -1 | -- | -- | -1.04 | -- | 1003 | 13025 | -- | -- |
| 464.6 | 1 | 7.11 | -- | 0.79 | -2.73 | -- | -- | 0.195 | 4.5 | 1016 | 47520 | -- | -- |
| 370.41 | 0.899 | 7.36 | -4.02 | -- | -- | -- | -- | -0.868 | -- | -- | -- | -- | -- |
| 772.62 | 1.3 | 7.26 | -- | 0.65 | -- | -- | -- | -0.437 | 4 | -- | -- | -- | -- |
| 492.63 | 1.03 | 7.11 | -- | -- | -2.75 | -- | -- | 0.239 | -- | 1016 | 47520 | -- | -- |
| 795.7 | 1.32 | 7.26 | -- | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 300.04 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 8 | 303.48 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 9 | 303.49 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 11 | 304.02 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 17 | 304.38 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 22 | 304.52 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 23 | 304.54 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 32 | 304.72 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 48 | 304.93 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 59 | 304.95 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 63 | 305.01 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 73 | 305.02 | wind | 7 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 78 | 305.09 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 18 |
| 82 | 305.11 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 85 | 305.14 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 98 | 305.25 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 99 | 305.26 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 106 | 305.29 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 126 | 305.40 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 15 |
| 137 | 305.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 144 | 305.54 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 146 | 305.55 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 151 | 305.56 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 169 | 305.66 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 177 | 305.70 | atmosphere | 995 | 14400 | < th | dose independent | sin | 22 | NA |
| 182 | 305.74 | atmosphere | 995 | 14400 | > th | dose independent | sin | 22 | NA |
| 203 | 305.84 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 212 | 305.87 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 217 | 305.88 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 16 |
| 221 | 305.89 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 225 | 305.91 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 237 | 305.99 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 280 | 306.16 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 289 | 306.20 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 298 | 306.26 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 301 | 306.28 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 302 | 306.28 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 308 | 306.30 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 342 | 306.42 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 362 | 306.48 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 367 | 306.49 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 379 | 306.51 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 420 | 306.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 426 | 306.62 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 470 | 306.71 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 477 | 306.72 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 2 | NA |
| 495 | 306.76 | atmosphere | 995 | 14400 | > th | dose independent | sin | 5 | NA |
| 520 | 306.82 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 596 | 306.90 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 599 | 306.91 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 9 | NA |
| 652 | 307.02 | atmosphere | 995 | 14400 | < th | dose independent | sin | 5 | NA |
| 749 | 307.11 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 9 | NA |
| 960 | 307.43 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 5 | 18 |