Os01g0668100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabinogalactan-like protein.
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Os01g0668100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabinogalactan-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1625.16 | 1.89 | 5.68 | -6.67 | 1.97 | 2.97 | -1.8 | -12.9 | -1.54 | 10.4 | 25.8 | 1154 | 7.5 | -- |
| 1666.68 | 1.9 | 5.48 | -4.05 | 1.86 | 1.44 | -2.32 | -- | -1.19 | 10.2 | 25.82 | 1169 | 8.6 | -- |
| 1636.09 | 1.88 | 5.66 | -6.68 | 2 | 2.91 | -- | -13 | -1.41 | 10.2 | 26.24 | 1155 | 7.03 | -- |
| 1664.01 | 1.9 | 5.36 | -4.11 | 1.96 | 1.55 | -- | -- | -0.981 | 10.1 | 26.3 | 1141 | 7.55 | -- |
| 1850.89 | 2 | 5.69 | -6.62 | -- | 2.73 | -- | -12.5 | -1.3 | -- | 26.6 | 1288 | 6.77 | -- |
| 1741.45 | 1.96 | 5.36 | -3.68 | 1.89 | -- | -1.49 | -- | -1.02 | 9.51 | -- | -- | -- | -- |
| 1749.51 | 1.96 | 5.36 | -3.74 | 1.9 | -- | -- | -- | -1.02 | 9.42 | -- | -- | -- | -- |
| 1854.99 | 2.01 | 5.79 | -4.33 | -- | 1.82 | -- | -- | -1.68 | -- | 9.386 | 1122 | 5.99 | -- |
| 2092.65 | 2.13 | 5.23 | -- | 1.94 | 0.856 | -- | -- | -0.47 | 9.93 | 27.35 | 1156 | 7.13 | -- |
| 1961.69 | 2.07 | 5.42 | -3.75 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 2118.41 | 2.15 | 5.27 | -- | 1.91 | -- | -- | -- | -0.603 | 9.56 | -- | -- | -- | -- |
| 2125.37 | 2.15 | 5.33 | -- | -- | 1.95 | -- | -- | -0.621 | -- | -68.21 | 428 | 0.0978 | -- |
| 2333.12 | 2.25 | 5.32 | -- | -- | -- | -- | -- | -0.597 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1616.84 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 15 | 1619.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 17 | 1620.31 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 21 | 1620.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 22 | 1621.18 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 25 | 1621.45 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 29 | 1628.08 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 48 | 1631.67 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 98 | 1633.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 127 | 1634.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 138 | 1636.19 | temperature | 30 | 14400 | > th | dose dependent | sin | 11 | NA |
| 158 | 1636.46 | radiation | 1 | 30 | < th | dose independent | rect. | 4 | 13 |
| 173 | 1636.59 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 174 | 1636.62 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 183 | 1637.13 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 253 | 1637.69 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 260 | 1637.85 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 270 | 1638.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 271 | 1638.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 272 | 1638.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 301 | 1638.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 337 | 1638.53 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 421 | 1638.71 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 541 | 1638.92 | temperature | 30 | 14400 | < th | dose independent | sin | 9 | NA |
| 602 | 1639.49 | temperature | 30 | 14400 | > th | dose independent | sin | 9 | NA |
| 628 | 1640.01 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 681 | 1640.21 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 703 | 1640.26 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 753 | 1640.68 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 773 | 1640.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 897 | 1642.99 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 899 | 1643.12 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 907 | 1643.34 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |