BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0668100 Os01g0668100|AK105603
(247 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247 139 2e-33
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 134 4e-32
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 129 1e-30
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 125 2e-29
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 122 2e-28
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 64 1e-10
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 59 3e-09
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 57 6e-09
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 55 3e-08
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 47 7e-06
>AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247
Length = 246
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 94/149 (63%), Gaps = 3/149 (2%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEK GQ+T FIRL+K TQ Q+N+QLN+S + NG TVFAPTDNAFN+LK GTLNSL+
Sbjct: 40 ILEKAGQFTLFIRLLKSTQASDQINTQLNSS-SSNGLTVFAPTDNAFNSLKSGTLNSLSD 98
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQA-SGTDGPYTLXXXXXXXXXXXXXXXXXX 159
QQ+V LVQ HVLP +M FQT SNP+RTQA G +G + L
Sbjct: 99 QQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSA 158
Query: 160 XXXXXALSAVKPLAVYSVDKVLLPFELFG 188
S K LAVY VD+VLLP +FG
Sbjct: 159 TVANSVYSD-KQLAVYQVDQVLLPLAMFG 186
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEKGGQ+TTFI L+ TQ +Q+N Q+N+S G TVFAPTDNAF NLKPGTLN L+
Sbjct: 43 ILEKGGQFTTFIHLLNITQVGSQVNIQVNSS--SEGMTVFAPTDNAFQNLKPGTLNQLSP 100
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGTD-GPYTLXXXXXXXXXXXXXXXXXX 159
QV L+ HV P++YSMD + SNPVRTQASG D G Y L
Sbjct: 101 DDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGL-NFTGQTNQINVSTGYVE 159
Query: 160 XXXXXALSAVKPLAVYSVDKVLLPFELFG 188
+L +PLAVY VD VLLP E+FG
Sbjct: 160 TRISNSLRQQRPLAVYVVDMVLLPGEMFG 188
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEKGGQ+ T IRL+ TQ Q+N Q+N+S G TV APTDNAF NLKPGTLN L+
Sbjct: 40 ILEKGGQFVTLIRLLNTTQIGNQINIQINSS--SEGMTVLAPTDNAFQNLKPGTLNKLSP 97
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGTD--GPYTLXXXXXXXXXXXXXXXXX 158
QV L+ HV P+FY+++ + SNPVRTQASG D G Y L
Sbjct: 98 DDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGL-NFTGQGNQVNVSTGVV 156
Query: 159 XXXXXXALSAVKPLAVYSVDKVLLPFELFG 188
+L +PLAVY VD VLLP E+FG
Sbjct: 157 ETRLSTSLRQERPLAVYVVDMVLLPEEMFG 186
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LE G Q+TT I+L+ TQ Q++ QLN+S G T+FAPTDNAFN LKPGTLNSLT
Sbjct: 42 ILEAGHQFTTLIQLLNTTQVGFQVSVQLNSS--DQGMTIFAPTDNAFNKLKPGTLNSLTY 99
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGTDG-PYTLXXXXXXXXXXXXXXX-XX 158
QQQ+ L+ H++P++YS+ ASNPVRTQA+G DG + L
Sbjct: 100 QQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVV 159
Query: 159 XXXXXXALSAVKPLAVYSVDKVLLPFELFG 188
AL PLAVY VD VLLP ELFG
Sbjct: 160 ETRINNALRQQFPLAVYVVDSVLLPEELFG 189
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEK GQ+T FIRL+K T QL QLNNS NG T+FAP+D++F LK GTLNSLT
Sbjct: 43 ILEKAGQFTVFIRLLKSTGVANQLYGQLNNS--DNGITIFAPSDSSFTGLKAGTLNSLTD 100
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGT-DGPYTLXXXXXXXXXXXXXXXXXX 159
+QQV L+Q HV+P + S +FQT SNP+RTQA + DG + L
Sbjct: 101 EQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNT 160
Query: 160 XXXXXALSAVKPLAVYSVDKVLLPFELF 187
S LAVY VDKVLLP ++F
Sbjct: 161 TVSGNVYSD-GQLAVYQVDKVLLPQQVF 187
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+L G + TF+ + T +Q NN+ G T+F P D+AF K L++LT+
Sbjct: 50 LLSVAGPFHTFLDYLLSTGVIETFQNQANNT--EEGITIFVPKDDAFKAQKNPPLSNLTK 107
Query: 101 QQQVALVQGHVLPQFYSMDSFQ--TASNPVRTQASGTDGPYTLXXXXXXXXXXXXXXXXX 158
Q LV H LP +YS+ F+ + S PV T A G Y+L
Sbjct: 108 DQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQ---YSLKFTDVSGTVRIDSLWTR 164
Query: 159 XXXXXXALSAVKPLAVYSVDKVLLPFELFG 188
S P+AVY V++VLLP +FG
Sbjct: 165 TKVSSSVFST-DPVAVYQVNRVLLPEAIFG 193
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 66 SQLNNSFNGNGYTVFAPTDNAFNNLKPGT-LNSLTQQQQVALVQGHVLPQFYSMDSFQTA 124
++ N G G TVF PTD+AF++L L SL +Q+ +++ HVL +Y++ S ++
Sbjct: 232 TEFENDERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESI 291
Query: 125 SNPVR----TQASGTDGPYTLXXXXXXXXXXXXXXXXXXXXXXXALSAVKPLAVYSVDKV 180
+NPV+ T+ G G YTL P++V+ V KV
Sbjct: 292 TNPVQPTLATEEMGA-GSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKV 350
Query: 181 LLPFELF 187
LLP ELF
Sbjct: 351 LLPKELF 357
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 76 GYTVFAPTDNAFNNLKPGTLNSLTQQQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGT 135
G TVFAP+D AF L LTQ + V+L++ H L ++ S +T N + T A+
Sbjct: 222 GLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNG 281
Query: 136 DGPYTLXXXXXXXXXXXXXXXXXXXXXXXALSAVKPLAVYSVDKVLLPFELFG 188
G + L L A P+ +++VD VLLP ELFG
Sbjct: 282 AGKFDLTTSTSGDEVILHTGVAPSRLADTVLDAT-PVVIFTVDNVLLPAELFG 333
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEK G TF L+ + S + G TVFAP+D AF L +LTQ
Sbjct: 194 LLEKAG-CKTFANLLVSSGVIKTFESTVEK-----GLTVFAPSDEAFKARGVPDLTNLTQ 247
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGTDGPYTLXXXXXXXXXXXXXXXXXXX 160
+ V+L++ H L ++ S +T + + T A+ G Y L
Sbjct: 248 AEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGPSR 307
Query: 161 XXXXALSAVKPLAVYSVDKVLLPFELFG 188
+ P+ +++VD VLLP ELFG
Sbjct: 308 LADTVVDET-PVVIFTVDNVLLPAELFG 334
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Query: 41 VLEKGGQYTTFIRLMKETQQDTQLNSQLNNSFNGNGYTVFAPTDNAFNNLKPGTLNSLTQ 100
+LEK G F ++K T D ++ G TVF P+D+A P SL+
Sbjct: 194 ILEKQG-CKAFSDILKSTGADKTFQDTVDG-----GLTVFCPSDSAVGKFMP-KFKSLSP 246
Query: 101 QQQVALVQGHVLPQFYSMDSFQTASNPVRTQASGTDGPYTLXXXXXXXXXXXXXXXXXXX 160
+ ALV H +P + S+ ++ + V T A+ + +
Sbjct: 247 ANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETDVVTAK 306
Query: 161 XXXXALSAVKPLAVYSVDKVLLPFELF 187
L +PL VY +DKVLLP E++
Sbjct: 307 VMG-TLKDQEPLIVYKIDKVLLPREIY 332
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,088,591
Number of extensions: 94255
Number of successful extensions: 211
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 198
Number of HSP's successfully gapped: 10
Length of query: 247
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 151
Effective length of database: 8,474,633
Effective search space: 1279669583
Effective search space used: 1279669583
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)