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Os01g0664100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0157) R2 : 0.37
β1 : -0.934 (0.0576) R2dD : 0.376 R2D : 0.316
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.183 (0.0336) R2dN8 : 0.0548 R2N8 : -0.00565
σ : 0.295
deviance : 39.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.21 0.231 11 -0.904 0.437 0.447 -0.291 -0.55 -0.27 8.11 1005 6 -- --
24.64 0.233 11 -0.916 0.438 0.458 -0.332 -- -0.268 8.16 1005 4 -- --
24.43 0.232 11 -0.912 0.438 0.453 -- -0.595 -0.271 8.03 1005 2 -- --
24.97 0.234 11 -0.926 0.439 0.46 -- -- -0.268 8.07 1005 2 -- --
34.78 0.276 11 -0.903 -- 0.551 -- -0.622 -0.281 -- 1005 10 -- --
27.73 0.247 11 -0.928 0.465 -- -0.347 -- -0.189 8.1 -- -- -- --
28.08 0.248 11 -0.938 0.467 -- -- -- -0.189 8 -- -- -- --
35.35 0.277 11 -0.918 -- 0.549 -- -- -0.278 -- 1005 50 -- --
47.54 0.323 11 -- 0.43 0.509 -- -- -0.172 8.22 1005 2 -- --
39.97 0.295 11 -0.934 -- -- -- -- -0.183 -- -- -- -- --
51.29 0.335 11 -- 0.461 -- -- -- -0.0843 8.15 -- -- -- --
57.31 0.353 11 -- -- 0.605 -- -- -0.184 -- 1005 133 -- --
62.97 0.37 11 -- -- -- -- -- -0.0792 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.34 temperature 15 270 > th dose dependent rect. 21 10
16 23.26 temperature 15 720 > th dose dependent rect. 20 7
34 23.41 atmosphere 1005 10 > th dose dependent rect. 7 17
37 23.43 temperature 30 720 < th dose dependent rect. 22 7
38 23.44 temperature 20 270 > th dose independent rect. 22 18
44 23.46 radiation 10 30 < th dose independent rect. 21 21
50 23.48 humidity 80 4320 > th dose independent rect. 2 7
58 23.51 temperature 20 270 > th dose independent rect. 21 10
59 23.51 radiation 40 1440 < th dose dependent rect. 1 6
61 23.52 radiation 1 1440 > th dose dependent rect. 5 2
73 23.54 radiation 40 1440 < th dose dependent rect. 22 9
74 23.55 humidity 80 4320 > th dose independent rect. 6 2
90 23.55 radiation 10 270 < th dose dependent rect. 21 20
104 23.58 radiation 20 1440 < th dose dependent rect. 5 2
109 23.59 humidity 80 4320 > th dose independent rect. 5 4
123 23.61 atmosphere 1005 10 > th dose dependent rect. 3 21
124 23.62 humidity 80 4320 < th dose independent rect. 5 4
127 23.63 humidity 80 4320 < th dose independent rect. 2 7
134 23.65 humidity 80 4320 < th dose independent rect. 24 10
141 23.66 atmosphere 1005 10 > th dose dependent rect. 7 23
156 23.68 atmosphere 1005 90 > th dose dependent rect. 3 20
175 23.72 temperature 30 720 < th dose dependent rect. 23 5
184 23.72 atmosphere 1005 30 > th dose dependent rect. 7 14
219 23.77 radiation 20 30 < th dose dependent rect. 21 21
224 23.78 atmosphere 1005 270 > th dose dependent rect. 4 17
230 23.79 temperature 20 10 > th dose dependent rect. 23 8
239 23.81 temperature 20 720 > th dose dependent sin 12 NA
257 23.84 radiation 10 270 < th dose independent rect. 21 11
258 23.84 radiation 10 1440 < th dose dependent sin 10 NA
294 23.87 radiation 10 1440 < th dose dependent rect. 17 16
304 23.89 radiation 10 90 < th dose independent rect. 23 18
351 23.92 radiation 30 1440 < th dose dependent rect. 17 15
385 23.95 humidity 80 4320 < th dose dependent rect. 23 10
396 23.96 radiation 10 10 < th dose independent rect. 24 16
415 23.97 atmosphere 1005 10 > th dose dependent sin 19 NA
466 24.02 radiation 10 1440 < th dose dependent rect. 2 12
473 24.03 temperature 15 270 > th dose dependent sin 9 NA
477 24.03 radiation 10 1440 < th dose dependent rect. 4 10
500 24.04 radiation 10 1440 < th dose dependent rect. 17 21
501 24.05 humidity 80 720 < th dose independent rect. 23 11
510 24.06 atmosphere 1005 30 > th dose independent rect. 7 14
511 24.06 radiation 10 10 < th dose independent rect. 21 19
562 24.09 temperature 25 720 < th dose dependent sin 11 NA
575 24.11 humidity 80 720 < th dose independent rect. 1 9
583 24.12 radiation 10 10 < th dose independent sin 4 NA
588 24.12 atmosphere 1010 270 < th dose independent rect. 21 19
598 24.12 atmosphere 1005 10 > th dose dependent rect. 18 23
604 24.13 humidity 90 1440 < th dose dependent rect. 3 7
621 24.15 radiation 10 30 < th dose independent rect. 6 12
634 24.15 atmosphere 1005 10 > th dose dependent rect. 16 23
684 24.19 temperature 20 720 > th dose independent rect. 20 7
713 24.20 radiation 20 270 < th dose dependent rect. 21 11
721 24.20 atmosphere 1005 10 > th dose dependent rect. 14 23
766 24.23 atmosphere 1005 10 > th dose dependent rect. 18 21
771 24.24 radiation 20 720 < th dose independent rect. 15 17
776 24.24 radiation 20 30 < th dose dependent rect. 6 12
778 24.24 radiation 10 270 < th dose dependent rect. 21 13
840 24.28 atmosphere 1005 10 > th dose dependent no NA NA
905 24.31 humidity 80 720 < th dose independent rect. 5 5
910 24.31 radiation 1 1440 > th dose dependent sin 11 NA
944 24.32 atmosphere 1005 10 > th dose dependent rect. 16 21
951 24.33 wind 7 4320 > th dose dependent rect. 18 2
980 24.35 radiation 30 14400 > th dose independent rect. 7 1