Os01g0659800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0659800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.34 | 0.626 | 5.88 | 0.396 | 0.219 | -2.03 | 1.15 | 4.64 | 0.0971 | 1.07 | 21.98 | 1215 | -- | -- |
| 190.52 | 0.643 | 6.03 | -0.877 | 0.208 | -1.78 | 1.45 | -- | -0.247 | 0.648 | 20.24 | 1191 | -- | -- |
| 181.89 | 0.628 | 5.87 | 0.508 | 0.26 | -2.08 | -- | 5.38 | 0.113 | 2.45 | 22.4 | 1202 | -- | -- |
| 199.19 | 0.657 | 6.04 | -0.933 | 0.196 | -1.67 | -- | -- | -0.261 | 4.78 | 20.57 | 1329 | -- | -- |
| 185.03 | 0.634 | 5.86 | 0.581 | -- | -2.01 | -- | 5.49 | 0.134 | -- | 22.54 | 1262 | -- | -- |
| 279.04 | 0.783 | 6.12 | -1.48 | 0.101 | -- | -1.34 | -- | -0.64 | 11.5 | -- | -- | -- | -- |
| 286.62 | 0.793 | 6.12 | -1.54 | 0.123 | -- | -- | -- | -0.647 | 9.59 | -- | -- | -- | -- |
| 200.72 | 0.66 | 6.04 | -0.936 | -- | -1.62 | -- | -- | -0.261 | -- | 20.6 | 1426 | -- | -- |
| 203.78 | 0.665 | 5.93 | -- | 0.0353 | -2.35 | -- | -- | 0.149 | 10.9 | 15.29 | 8438 | -- | -- |
| 287.52 | 0.792 | 6.12 | -1.54 | -- | -- | -- | -- | -0.647 | -- | -- | -- | -- | -- |
| 348.87 | 0.874 | 6.08 | -- | 0.13 | -- | -- | -- | -0.476 | 10.5 | -- | -- | -- | -- |
| 203.44 | 0.664 | 5.95 | -- | -- | -2.47 | -- | -- | 0.104 | -- | 10.4 | 8342 | -- | -- |
| 349.9 | 0.873 | 6.08 | -- | -- | -- | -- | -- | -0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 4 | 182.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 18 | 182.47 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 63 | 183.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 64 | 183.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 76 | 183.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 160 | 184.11 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 170 | 184.28 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 173 | 184.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 255 | 184.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 317 | 185.08 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 475 | 185.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 684 | 186.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 791 | 186.99 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 823 | 187.16 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 914 | 187.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 922 | 187.78 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 949 | 187.94 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |