BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0659800 Os01g0659800|AK109718
         (296 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01200.1  | chr4:506783-507535 REVERSE LENGTH=251              103   8e-23
AT2G13350.1  | chr2:5536525-5537730 REVERSE LENGTH=402             86   2e-17
AT2G33320.1  | chr2:14119526-14121334 REVERSE LENGTH=603           80   1e-15
AT3G04360.1  | chr3:1157025-1158200 REVERSE LENGTH=392             79   2e-15
AT1G04540.1  | chr1:1237256-1239061 FORWARD LENGTH=602             76   2e-14

>AT4G01200.1 | chr4:506783-507535 REVERSE LENGTH=251
          Length = 250

 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 8/132 (6%)

Query: 16  EGERILEVTLISAQGLKPPSGLRRRLLQAYAVAWVDAARRLQTRPDRAGGVDPEWHERLL 75
           E  ++LE+ LISAQGLK P+G  RRL Q YA  WVD++ +L+TR DR G  +P W+++ +
Sbjct: 2   EETQVLEINLISAQGLKEPTGKLRRL-QTYASVWVDSSSKLRTRIDRIGSENPIWNDKFV 60

Query: 76  FRVHEAALADDSRAAVTVEIYAAPAGGWHIGGDSLVGSARFLLGDHGLLSRPVGSPSMFA 135
           F+V    L+ ++ + V++EIYA    G+    D L+G+ RFL+ +  L +  V  PS+ A
Sbjct: 61  FQVSPEFLSSET-SGVSIEIYAV---GYL--RDHLIGTVRFLVSNF-LPTAAVKVPSLVA 113

Query: 136 VGVRRPSGRVHG 147
           + +RRPSG+ HG
Sbjct: 114 LQIRRPSGKFHG 125



>AT2G13350.1 | chr2:5536525-5537730 REVERSE LENGTH=402
          Length = 401

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 13/129 (10%)

Query: 19  RILEVTLISAQGLKPPSGLRRRLLQAYAVAWVDAARRLQTRPDRAGGVDPEWHERLLFRV 78
           +ILE+ +ISAQ L P +    R ++ YA+AW+D  R+L TR D  GG  P W+++ +FR+
Sbjct: 8   QILELNIISAQELAPVA----RCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRL 63

Query: 79  HEAALADDSRAAVTVEIYAAPAGGWHIGGDSLVGSARFLLGDHGLLSRPVGSPSMFAVGV 138
            E AL  D+ + V +EIYA      H   D  VG+ + L+ D   L  P  +     + V
Sbjct: 64  DEEALY-DATSIVVIEIYA-----LHWFKDIHVGTVQALISD---LVSPSSAMRFVTLEV 114

Query: 139 RRPSGRVHG 147
            R SGR HG
Sbjct: 115 LRASGRPHG 123



>AT2G33320.1 | chr2:14119526-14121334 REVERSE LENGTH=603
          Length = 602

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 23/142 (16%)

Query: 19  RILEVTLISAQGLKPPSGLRRRLLQAYAVAWVDAARRLQTRPDRAGGVDPEWHERLLFRV 78
           ++LE+ +ISAQ L P S    R ++ YAVAWV + R+L TR D  GG +P W+++ +FRV
Sbjct: 8   QLLELNIISAQDLAPVS----RKMKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRV 63

Query: 79  HEAALADDSRAAVTVEIYAAPAGGWHIGGDSLVGSARFLLGDHGLLSRPVGSPS------ 132
            E  L  D+ +AV VEIYA      H   D  VG+ R L+ +    +R  G  S      
Sbjct: 64  SEDFLYADT-SAVVVEIYA-----LHWFRDVHVGTVRVLISNLIPPNRRPGYRSNEEYRR 117

Query: 133 -------MFAVGVRRPSGRVHG 147
                    A+ VRRPSGR  G
Sbjct: 118 TPPPGMRFVALQVRRPSGRPQG 139



>AT3G04360.1 | chr3:1157025-1158200 REVERSE LENGTH=392
          Length = 391

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 22/140 (15%)

Query: 20  ILEVTLISAQGLKPPSGLRRRLLQAYAVAWV--DAARRLQTRPDRAGGVDPEWHERLLFR 77
           +LE+ LISAQ L P S    R ++ Y+VAW+  D  R+L TR D++   +P W+E+ +FR
Sbjct: 10  VLEINLISAQDLAPVS----RNMKTYSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFR 65

Query: 78  VHEAALADDSRAAVTVEIYAAPAGGWHIGGDSLVGSARFLLGD-----HGLLSRPVGSPS 132
           V++  L  D+ +A+ +EIYAA    W    D+LVG+   LL D      G      G   
Sbjct: 66  VNDKILYVDA-SAIVIEIYAA---AW--AKDALVGTVNVLLSDLFAPWSGFGDGNDGGGG 119

Query: 133 -----MFAVGVRRPSGRVHG 147
                +  + +RRPSGR+ G
Sbjct: 120 NNNMRLVTLQIRRPSGRLQG 139



>AT1G04540.1 | chr1:1237256-1239061 FORWARD LENGTH=602
          Length = 601

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 10/102 (9%)

Query: 19  RILEVTLISAQGLKPPSGLRRRLLQAYAVAWVDAARRLQTRPDRAGGVDPEWHERLLFRV 78
           ++LE+ +ISAQ L P +    R  + YAVAWV + R+L TR D  GG +P W+++ +FRV
Sbjct: 9   QLLELNIISAQDLAPVA----RKTKTYAVAWVHSERKLTTRVDYNGGTNPTWNDKFVFRV 64

Query: 79  HEAALADDSRAAVTVEIYAAPAGGWHIGGDSLVGSARFLLGD 120
           +E  L  D+ +AV +EIYA      H   D  VG+ R L+ +
Sbjct: 65  NEEFLYADT-SAVVIEIYA-----LHWFRDVHVGTVRVLISN 100



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,327,556
Number of extensions: 189973
Number of successful extensions: 349
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 345
Number of HSP's successfully gapped: 5
Length of query: 296
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 198
Effective length of database: 8,419,801
Effective search space: 1667120598
Effective search space used: 1667120598
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)