Os01g0658900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : OSBZ8.
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Os01g0658900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : OSBZ8.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 205.04 | 0.673 | 7.8 | -0.591 | 1.73 | 1.88 | 0.0612 | -0.733 | 0.515 | 10.6 | 71.63 | 1161 | -- | -- |
| 205.53 | 0.668 | 7.79 | -0.544 | 1.74 | 1.81 | 0.125 | -- | 0.498 | 10.5 | 72.53 | 1162 | -- | -- |
| 205.05 | 0.667 | 7.79 | -0.59 | 1.73 | 1.89 | -- | -0.779 | 0.521 | 10.6 | 71.36 | 1161 | -- | -- |
| 205.62 | 0.668 | 7.79 | -0.541 | 1.73 | 1.8 | -- | -- | 0.499 | 10.6 | 72.42 | 1162 | -- | -- |
| 345.61 | 0.866 | 7.86 | -0.505 | -- | 1.5 | -- | -0.401 | 0.386 | -- | 81.51 | 1523 | -- | -- |
| 275.48 | 0.778 | 7.83 | -0.207 | 1.45 | -- | -0.141 | -- | 0.333 | 10.1 | -- | -- | -- | -- |
| 275.56 | 0.777 | 7.83 | -0.212 | 1.46 | -- | -- | -- | 0.332 | 10.1 | -- | -- | -- | -- |
| 345.78 | 0.866 | 7.86 | -0.463 | -- | 1.47 | -- | -- | 0.391 | -- | 81.69 | 1526 | -- | -- |
| 213.03 | 0.68 | 7.78 | -- | 1.72 | 1.68 | -- | -- | 0.541 | 10.6 | 72.76 | 1161 | -- | -- |
| 403.81 | 0.939 | 7.87 | -0.232 | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
| 276.75 | 0.778 | 7.83 | -- | 1.46 | -- | -- | -- | 0.356 | 10.1 | -- | -- | -- | -- |
| 351.16 | 0.873 | 7.85 | -- | -- | 1.41 | -- | -- | 0.427 | -- | 83 | 1526 | -- | -- |
| 405.23 | 0.94 | 7.86 | -- | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.59 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 4 | 213.00 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 9 | 213.97 | humidity | 60 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 11 | 214.25 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 20 | 214.65 | humidity | 70 | 1440 | < th | dose dependent | sin | 11 | NA |
| 26 | 214.89 | humidity | 60 | 1440 | > th | dose independent | sin | 18 | NA |
| 29 | 214.91 | humidity | 60 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 33 | 215.03 | humidity | 60 | 1440 | < th | dose independent | sin | 18 | NA |
| 39 | 215.14 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 13 |
| 41 | 215.15 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 58 | 215.17 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 69 | 215.27 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 72 | 215.30 | humidity | 60 | 1440 | < th | dose independent | no | NA | NA |
| 88 | 215.30 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 152 | 215.31 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 169 | 215.40 | humidity | 60 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 171 | 215.42 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 173 | 215.42 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 177 | 215.43 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 15 |
| 179 | 215.43 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 188 | 215.44 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 195 | 215.44 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 269 | 215.51 | humidity | 60 | 1440 | > th | dose independent | rect. | 10 | 13 |
| 271 | 215.51 | humidity | 60 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 379 | 215.89 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 14 |
| 417 | 216.06 | humidity | 70 | 1440 | < th | dose dependent | no | NA | NA |
| 543 | 216.35 | humidity | 70 | 1440 | < th | dose dependent | sin | 18 | NA |
| 559 | 216.43 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 564 | 216.46 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 567 | 216.47 | humidity | 60 | 1440 | > th | dose independent | sin | 11 | NA |
| 568 | 216.47 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 570 | 216.47 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 14 |
| 626 | 216.64 | humidity | 60 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 752 | 216.92 | humidity | 60 | 1440 | < th | dose independent | sin | 11 | NA |
| 915 | 217.20 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 988 | 217.57 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |