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Os01g0655500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.83 (0.0456) R2 : 0.774
β1 : 1.97 (0.298) R2dD : 0.164 R2D : -0.279
β2 : 2.39 (0.0742) R2dC : 0.528 R2C : 0.591
β3 : -2.11 (0.145) R2dE : 0.315 R2E : 0.189
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.7 (1.09) R2dD*E : 0.197 R2D*E : -0.268
γ1 : 0.413 (0.0896) R2dN8 : 0.0271 R2N8 : -0.0489
σ : 0.566
deviance : 147.63
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C
peak time of C : 13.6
E
wheather : temperature
threshold : 26.05
memory length : 1283
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.19 0.554 8.84 1.83 2.39 -2.02 -1.5 6.65 0.388 13.6 25.99 1318 -- --
163.26 0.595 9.06 0.256 2.51 -1.41 -0.355 -- 0.162 13.3 25.32 1410 -- --
147.63 0.566 8.83 1.97 2.39 -2.11 -- 7.7 0.413 13.6 26.05 1283 -- --
163.54 0.596 9.02 0.0895 2.39 -1.39 -- -- 0.137 13.5 25.01 1336 -- --
423.44 0.958 8.79 2.22 -- -3.21 -- 8.34 0.738 -- 24 1073 -- --
227.07 0.706 9.07 -0.341 2.59 -- -1.41 -- -0.0906 13.6 -- -- -- --
235.04 0.718 9.08 -0.387 2.59 -- -- -- -0.0984 13.6 -- -- -- --
455.6 0.994 9.03 0.238 -- -2.41 -- -- 0.203 -- 23.84 1082 -- --
163.08 0.595 9.05 -- 2.4 -1.32 -- -- 0.0289 13.5 25.36 1335 -- --
645.3 1.19 9.11 -0.491 -- -- -- -- -0.155 -- -- -- -- --
238.99 0.723 9.07 -- 2.6 -- -- -- -0.0552 13.6 -- -- -- --
456.91 0.996 9.04 -- -- -2.38 -- -- 0.172 -- 23.9 1079 -- --
651.67 1.19 9.1 -- -- -- -- -- -0.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.50 temperature 25 1440 > th dose dependent rect. 6 14
31 140.84 temperature 25 1440 > th dose dependent sin 23 NA
142 142.37 temperature 25 1440 > th dose dependent no NA NA
145 142.40 temperature 25 1440 > th dose dependent rect. 13 23
148 142.43 temperature 25 1440 > th dose dependent rect. 15 23
151 142.49 temperature 25 1440 > th dose dependent rect. 9 23
208 143.47 temperature 25 1440 > th dose dependent rect. 15 4
210 143.51 temperature 25 1440 > th dose dependent rect. 11 3
222 143.71 temperature 25 1440 > th dose dependent rect. 16 1
241 144.07 wind 5 43200 > th dose dependent rect. 10 6
290 145.19 wind 7 43200 < th dose independent rect. 9 7
306 145.57 wind 7 43200 > th dose independent rect. 9 7
307 145.57 radiation 10 1440 < th dose dependent rect. 18 8
408 147.27 wind 7 43200 < th dose independent sin 1 NA
437 147.58 wind 7 43200 > th dose independent sin 1 NA
459 147.80 temperature 30 1440 < th dose independent rect. 18 21
508 148.45 temperature 30 1440 < th dose independent rect. 18 19
534 148.82 radiation 1 1440 < th dose dependent rect. 18 3
539 148.84 radiation 1 1440 < th dose dependent rect. 18 1
562 149.07 temperature 30 1440 < th dose independent rect. 14 23
569 149.09 temperature 30 1440 > th dose independent rect. 18 21
571 149.10 wind 9 43200 < th dose dependent rect. 11 1
584 149.29 wind 5 43200 > th dose dependent rect. 5 11
586 149.35 wind 5 43200 > th dose dependent rect. 10 12
589 149.37 wind 1 43200 > th dose dependent rect. 11 1
610 149.53 temperature 30 1440 > th dose independent rect. 18 19
635 149.71 temperature 30 1440 < th dose independent sin 5 NA
640 149.74 temperature 30 1440 < th dose independent rect. 9 10
642 149.74 temperature 30 1440 < th dose independent rect. 9 12
643 149.74 temperature 30 1440 < th dose independent rect. 9 16
648 149.76 temperature 30 1440 < th dose independent rect. 9 19
651 149.78 temperature 30 1440 < th dose independent rect. 9 23
653 149.79 temperature 30 1440 < th dose independent rect. 9 21
663 149.85 temperature 30 1440 < th dose independent rect. 6 13
668 149.85 temperature 30 1440 < th dose independent rect. 5 20
678 149.86 temperature 30 1440 < th dose independent rect. 7 18
682 149.86 temperature 30 1440 < th dose independent rect. 5 23
700 149.88 temperature 30 1440 < th dose independent rect. 3 16
701 149.88 temperature 30 1440 < th dose independent rect. 3 18
703 149.88 temperature 30 1440 < th dose independent rect. 24 19
706 149.88 temperature 30 1440 < th dose independent rect. 24 21
707 149.88 temperature 30 1440 < th dose independent rect. 3 22
725 149.89 temperature 30 1440 > th dose independent rect. 14 23
726 149.89 temperature 30 1440 < th dose independent rect. 20 23
729 149.90 temperature 30 1440 < th dose independent no NA NA
773 149.95 temperature 30 1440 > th dose independent rect. 15 21
780 150.01 wind 5 43200 > th dose dependent sin 0 NA
796 150.13 temperature 30 1440 < th dose independent sin 10 NA
807 150.27 temperature 30 1440 < th dose independent rect. 9 6
808 150.28 temperature 30 1440 < th dose independent rect. 9 4
818 150.36 temperature 30 1440 < th dose independent rect. 11 23
832 150.46 temperature 30 1440 > th dose independent rect. 9 10
847 150.47 temperature 30 1440 < th dose independent rect. 5 10
860 150.51 temperature 30 1440 < th dose independent rect. 3 12
867 150.52 temperature 30 1440 < th dose independent rect. 24 15
879 150.55 temperature 30 1440 < th dose independent rect. 20 19
923 150.77 temperature 30 1440 > th dose independent sin 11 NA
924 150.77 temperature 30 1440 > th dose independent no NA NA