FiT-DB / Search/ Help/ Sample detail

Os01g0641700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0217) R2 : 0.827
β1 : -0.889 (0.0793) R2dD : 0.0494 R2D : 0.0413
β2 : 2.53 (0.0559) R2dC : 0.783 R2C : 0.775
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0518 (0.0462) R2dN8 : 0.000638 R2N8 : -0.00174
σ : 0.407
deviance : 75.67
__
_____
C
peak time of C : 7.28
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.54 0.38 10.7 -1.33 2.77 0.798 -0.805 -2.09 -0.05 7.33 25.84 779 -- --
66.42 0.38 10.7 -1.02 2.72 0.586 -0.588 -- 0.0329 7.35 25.84 813 -- --
67 0.381 10.7 -1.21 2.76 0.753 -- -1.26 -0.00316 7.33 26.3 777 -- --
67.32 0.382 10.7 -1.02 2.74 0.614 -- -- 0.0296 7.34 26.19 780 -- --
408.02 0.941 10.8 -1.11 -- 0.564 -- 0.225 -0.0327 -- 17.03 4350 -- --
73.99 0.403 10.7 -0.872 2.53 -- -0.79 -- 0.0501 7.27 -- -- -- --
75.67 0.407 10.7 -0.889 2.53 -- -- -- 0.0518 7.28 -- -- -- --
407.31 0.94 10.8 -1.21 -- 0.681 -- -- -0.0728 -- 14.79 5712 -- --
92.56 0.448 10.7 -- 2.61 0.393 -- -- 0.192 7.3 30.7 798 -- --
415.86 0.953 10.8 -0.845 -- -- -- -- 0.0946 -- -- -- -- --
96.5 0.46 10.7 -- 2.52 -- -- -- 0.151 7.31 -- -- -- --
425.47 0.961 10.7 -- -- -0.463 -- -- 0.341 -- 15.97 46775 -- --
434.7 0.973 10.7 -- -- -- -- -- 0.188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.71 temperature 30.0 10 < th dose dependent rect. 13 7
13 61.89 humidity 70.0 10 > th dose independent rect. 13 7
28 62.86 temperature 30.0 90 < th dose dependent rect. 13 20
31 62.93 temperature 30.0 10 < th dose dependent rect. 13 20
33 63.00 temperature 30.0 10 < th dose dependent rect. 15 18
55 63.32 radiation 1.0 90 < th dose independent rect. 7 12
56 63.33 radiation 1.0 90 < th dose independent rect. 5 14
58 63.35 temperature 30.0 90 < th dose dependent rect. 17 2
63 63.45 radiation 1.0 90 < th dose dependent rect. 5 14
69 63.54 radiation 1.0 90 < th dose independent rect. 13 6
75 63.65 temperature 10.0 720 > th dose dependent rect. 10 11
87 63.78 radiation 1.0 90 < th dose dependent rect. 13 6
88 63.79 radiation 1.0 90 < th dose dependent rect. 7 12
91 63.82 temperature 30.0 30 < th dose independent rect. 15 5
95 63.94 temperature 10.0 270 > th dose dependent rect. 8 14
100 63.98 temperature 30.0 270 < th dose independent rect. 15 1
104 64.01 humidity 50.0 30 > th dose dependent rect. 15 5
109 64.04 temperature 20.0 10 > th dose dependent rect. 10 20
122 64.17 temperature 20.0 10 > th dose dependent rect. 10 16
144 64.34 temperature 25.0 4320 > th dose dependent rect. 4 2
150 64.37 radiation 1.0 43200 < th dose dependent rect. 21 3
160 64.49 humidity 70.0 10 > th dose independent rect. 17 3
163 64.53 temperature 30.0 270 < th dose independent rect. 13 19
167 64.56 temperature 30.0 270 < th dose independent rect. 13 5
179 64.64 radiation 1.0 10 < th dose dependent rect. 13 7
197 64.72 temperature 30.0 30 < th dose dependent rect. 22 22
198 64.73 temperature 25.0 4320 > th dose independent rect. 5 1
205 64.78 precipitation 0.1 1440 < th dose independent rect. 21 2
206 64.78 precipitation 0.1 1440 < th dose dependent rect. 21 2
208 64.80 radiation 1.0 43200 < th dose dependent rect. 23 1
209 64.80 temperature 20.0 10 > th dose dependent rect. 10 12
228 64.88 temperature 30.0 90 < th dose independent rect. 17 2
235 64.91 radiation 1.0 10 < th dose dependent rect. 15 5
240 64.95 radiation 1.0 43200 < th dose dependent rect. 21 6
262 65.04 temperature 10.0 10 > th dose dependent rect. 20 10
268 65.07 wind 9.0 43200 > th dose dependent rect. 17 6
276 65.10 temperature 10.0 10 > th dose dependent sin 17 NA
287 65.13 wind 9.0 43200 > th dose dependent rect. 17 4
292 65.15 wind 9.0 43200 > th dose independent rect. 19 3
293 65.15 wind 7.0 43200 > th dose dependent rect. 19 2
300 65.16 wind 9.0 43200 > th dose dependent rect. 19 4
320 65.21 temperature 25.0 720 > th dose dependent rect. 9 12
336 65.26 temperature 30.0 10 < th dose dependent sin 17 NA
342 65.27 temperature 15.0 720 > th dose dependent rect. 10 5
344 65.28 temperature 15.0 10 > th dose independent rect. 20 10
358 65.30 wind 9.0 43200 > th dose independent rect. 18 5
365 65.32 precipitation 0.1 43200 > th dose dependent rect. 20 1
382 65.35 wind 9.0 43200 < th dose independent rect. 18 5
399 65.39 wind 9.0 43200 < th dose independent rect. 19 3
419 65.41 temperature 25.0 720 > th dose dependent rect. 9 19
423 65.42 temperature 25.0 720 > th dose dependent rect. 9 17
438 65.47 radiation 1.0 90 < th dose dependent rect. 17 2
448 65.50 radiation 1.0 43200 < th dose dependent rect. 1 1
458 65.52 temperature 15.0 90 > th dose independent rect. 20 9
471 65.54 radiation 1.0 43200 < th dose dependent rect. 19 1
493 65.57 radiation 1.0 90 < th dose independent rect. 17 2
507 65.60 temperature 25.0 4320 < th dose independent rect. 5 1
538 65.65 wind 9.0 43200 > th dose dependent rect. 17 8
588 65.71 temperature 25.0 720 > th dose dependent sin 21 NA
603 65.75 temperature 10.0 720 > th dose dependent sin 21 NA
605 65.75 temperature 25.0 720 > th dose dependent rect. 1 20
653 65.80 atmosphere 995.0 43200 > th dose independent rect. 18 3
667 65.80 temperature 10.0 90 > th dose dependent rect. 19 23
668 65.81 temperature 15.0 30 > th dose independent rect. 20 19
693 65.82 temperature 25.0 720 > th dose dependent rect. 16 23
698 65.84 atmosphere 995.0 43200 > th dose independent rect. 15 7
711 65.85 temperature 10.0 270 > th dose dependent rect. 17 22
718 65.87 atmosphere 1005.0 10 > th dose dependent rect. 17 3
721 65.87 temperature 30.0 10 < th dose dependent rect. 13 11
727 65.89 atmosphere 995.0 43200 < th dose independent rect. 15 7
751 65.91 atmosphere 1005.0 30 > th dose dependent rect. 15 5
754 65.91 wind 9.0 43200 > th dose dependent rect. 19 8
772 65.92 temperature 25.0 720 > th dose dependent no NA NA
839 65.97 temperature 25.0 720 > th dose dependent rect. 14 23
848 65.99 wind 9.0 43200 > th dose independent rect. 18 10
873 66.02 temperature 25.0 720 > th dose dependent rect. 12 23
892 66.04 atmosphere 995.0 43200 > th dose independent rect. 16 1
948 66.11 wind 9.0 43200 < th dose independent rect. 18 9
965 66.13 atmosphere 995.0 43200 < th dose independent rect. 16 1
978 66.14 atmosphere 995.0 43200 < th dose independent rect. 18 1
986 66.14 atmosphere 995.0 43200 < th dose dependent rect. 18 1
998 66.15 humidity 50.0 270 > th dose independent rect. 15 2