Os01g0634900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CBS domain containing protein.
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Os01g0634900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CBS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.41 | 0.543 | 3.22 | -0.595 | 0.707 | 0.511 | -1.9 | -1.37 | 0.262 | 10.1 | 9.83 | 9 | -- | -- |
| 136.61 | 0.549 | 3.21 | -0.528 | 0.625 | 0.42 | -0.501 | -- | 0.295 | 9.62 | 9.828 | 3 | -- | -- |
| 137.44 | 0.55 | 3.22 | -0.556 | 0.638 | 0.433 | -- | -0.115 | 0.292 | 9.76 | 9.83 | 9 | -- | -- |
| 137.49 | 0.546 | 3.21 | -0.546 | 0.669 | 0.454 | -- | -- | 0.3 | 9.84 | 9.76 | 3 | -- | -- |
| 148.77 | 0.568 | 3.23 | -0.554 | -- | 0.207 | -- | -0.18 | 0.307 | -- | 26.65 | 8 | -- | -- |
| 143.54 | 0.562 | 3.22 | -0.508 | 0.363 | -- | -0.655 | -- | 0.319 | 7.01 | -- | -- | -- | -- |
| 144.65 | 0.563 | 3.22 | -0.521 | 0.362 | -- | -- | -- | 0.32 | 6.88 | -- | -- | -- | -- |
| 148.75 | 0.568 | 3.22 | -0.506 | -- | 0.224 | -- | -- | 0.33 | -- | 26.65 | 11 | -- | -- |
| 145.4 | 0.565 | 3.2 | -- | 0.62 | 0.411 | -- | -- | 0.356 | 9.76 | 9.76 | 3 | -- | -- |
| 151.54 | 0.575 | 3.22 | -0.513 | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
| 151.8 | 0.576 | 3.2 | -- | 0.356 | -- | -- | -- | 0.378 | 6.97 | -- | -- | -- | -- |
| 155.32 | 0.58 | 3.21 | -- | -- | 0.242 | -- | -- | 0.393 | -- | 27.88 | 23 | -- | -- |
| 158.48 | 0.588 | 3.21 | -- | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 126.72 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 4 | 126.89 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 5 | 127.14 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 8 | 127.35 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 10 | 127.36 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 11 | 127.44 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 12 | 127.50 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 13 | 127.52 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 14 | 127.65 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 31 | 127.68 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 32 | 127.69 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 33 | 127.69 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 34 | 127.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 35 | 127.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 37 | 127.71 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 41 | 127.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 65 | 127.91 | temperature | 30.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 83 | 127.96 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 9 |
| 85 | 127.97 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 87 | 127.98 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 88 | 127.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 92 | 127.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 96 | 127.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 101 | 127.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 102 | 127.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 103 | 127.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 106 | 127.99 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 107 | 127.99 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 122 | 127.99 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 22 |
| 128 | 128.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 129 | 128.02 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 131 | 128.03 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 159 | 128.13 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 166 | 128.14 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 13 |
| 172 | 128.14 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 17 |
| 182 | 128.15 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 223 | 128.22 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 263 | 128.24 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 265 | 128.25 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 399 | 128.29 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 427 | 128.33 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 434 | 128.35 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 435 | 128.35 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 441 | 128.35 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 477 | 128.35 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 20 |
| 535 | 128.36 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 618 | 128.40 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 621 | 128.41 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 628 | 128.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 635 | 128.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 711 | 128.55 | humidity | 80.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 724 | 128.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 726 | 128.57 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 727 | 128.57 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 731 | 128.57 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 732 | 128.57 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 735 | 128.57 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 738 | 128.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 740 | 128.57 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 922 | 128.79 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 963 | 128.83 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |