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Os01g0632300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.85 (0.0182) R2 : 0.235
β1 : -0.778 (0.0667) R2dD : 0.236 R2D : 0.235
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0063 (0.0389) R2dN8 : 5.89e-05 R2N8 : -0.0012
σ : 0.342
deviance : 53.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.4 0.299 7.76 -0.00164 0.247 -0.598 -0.263 1.88 0.265 21.3 21.55 2782 -- --
41.77 0.301 7.81 -0.421 0.228 -0.609 -0.233 -- 0.224 20.9 19.45 10070 -- --
40.58 0.297 7.77 -0.0165 0.267 -0.615 -- 1.86 0.262 21.2 21.53 2599 -- --
41.45 0.3 7.81 -0.347 0.24 -0.718 -- -- 0.23 20.5 15.1 10561 -- --
43.92 0.309 7.76 -0.0252 -- -0.606 -- 1.89 0.227 -- 21.9 4472 -- --
50.51 0.333 7.86 -0.782 0.23 -- -0.192 -- -0.00383 20.4 -- -- -- --
50.62 0.333 7.86 -0.776 0.232 -- -- -- -0.00362 20.2 -- -- -- --
44.56 0.311 7.8 -0.362 -- -0.704 -- -- 0.223 -- 15.1 10176 -- --
41.85 0.301 7.79 -- 0.246 -0.839 -- -- 0.314 20.5 9.036 23530 -- --
53.58 0.342 7.85 -0.778 -- -- -- -- -0.0063 -- -- -- -- --
66.48 0.381 7.84 -- 0.236 -- -- -- 0.0828 20 -- -- -- --
45.08 0.313 7.78 -- -- -0.846 -- -- 0.313 -- 8.914 23157 -- --
69.53 0.389 7.83 -- -- -- -- -- 0.08 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.27 wind 3 43200 < th dose independent rect. 11 1
2 38.36 wind 9 43200 < th dose dependent rect. 11 1
3 38.37 wind 3 43200 > th dose independent rect. 11 1
6 38.49 wind 1 43200 > th dose dependent rect. 11 1
7 38.56 radiation 1 14400 > th dose independent rect. 18 1
19 38.70 atmosphere 1005 43200 < th dose independent rect. 13 1
21 38.76 radiation 1 14400 < th dose independent rect. 18 7
23 38.76 radiation 1 14400 < th dose independent rect. 18 10
24 38.76 radiation 30 14400 > th dose independent rect. 16 16
25 38.77 atmosphere 1005 43200 < th dose independent rect. 11 3
29 38.79 radiation 1 14400 < th dose independent rect. 18 1
36 38.81 wind 7 43200 > th dose dependent rect. 9 5
37 38.82 atmosphere 1005 43200 > th dose independent rect. 11 3
38 38.82 atmosphere 1005 43200 < th dose independent rect. 15 13
39 38.82 atmosphere 1005 43200 < th dose independent rect. 11 17
40 38.83 atmosphere 1005 43200 < th dose independent rect. 16 8
42 38.83 atmosphere 1005 43200 < th dose independent rect. 11 15
43 38.83 atmosphere 1005 43200 < th dose independent rect. 13 15
45 38.84 radiation 20 4320 < th dose independent rect. 7 1
48 38.84 atmosphere 1005 43200 < th dose independent rect. 11 13
57 38.85 radiation 30 4320 > th dose dependent rect. 16 17
66 38.87 atmosphere 1005 43200 < th dose independent rect. 13 11
68 38.87 wind 9 43200 < th dose independent rect. 24 15
73 38.87 wind 7 43200 > th dose dependent rect. 2 13
74 38.87 wind 7 43200 > th dose dependent rect. 24 15
75 38.88 atmosphere 1005 43200 < th dose independent sin 16 NA
81 38.88 radiation 30 4320 < th dose independent rect. 16 17
88 38.89 wind 9 43200 < th dose independent rect. 2 13
95 38.90 wind 9 43200 > th dose independent rect. 24 15
103 38.92 atmosphere 1005 43200 > th dose independent rect. 11 1
111 38.93 radiation 1 4320 > th dose independent rect. 18 15
112 38.93 radiation 30 4320 > th dose dependent rect. 7 2
127 38.94 wind 9 43200 > th dose independent rect. 8 7
132 38.94 wind 9 43200 > th dose independent rect. 2 13
134 38.95 radiation 1 4320 > th dose independent rect. 18 17
137 38.96 atmosphere 1005 43200 > th dose independent rect. 13 1
144 38.97 atmosphere 1005 43200 < th dose independent rect. 18 3
149 38.97 atmosphere 1005 43200 > th dose independent rect. 15 13
152 38.97 radiation 1 4320 < th dose independent rect. 18 15
153 38.97 atmosphere 1005 43200 > th dose independent rect. 11 18
158 38.98 atmosphere 1005 43200 > th dose independent rect. 10 7
161 38.98 radiation 1 4320 < th dose independent rect. 18 17
163 38.99 wind 9 43200 < th dose independent rect. 8 7
171 39.00 atmosphere 1005 43200 > th dose independent rect. 19 1
173 39.00 atmosphere 1005 43200 < th dose independent rect. 10 7
210 39.03 atmosphere 1005 43200 > th dose independent rect. 10 13
218 39.04 atmosphere 1005 43200 > th dose independent rect. 15 8
226 39.05 atmosphere 1005 43200 > th dose independent sin 17 NA
229 39.05 atmosphere 1005 43200 > th dose independent rect. 10 10
239 39.06 radiation 40 4320 < th dose independent rect. 7 2
249 39.06 radiation 1 4320 < th dose dependent rect. 18 15
264 39.07 radiation 1 14400 < th dose dependent rect. 18 1
286 39.09 atmosphere 1005 43200 > th dose independent rect. 15 1
322 39.10 radiation 40 4320 < th dose independent rect. 24 9
330 39.10 radiation 1 4320 < th dose dependent rect. 18 17
384 39.14 radiation 10 1440 < th dose dependent rect. 18 11
387 39.15 wind 7 43200 > th dose independent rect. 10 2
426 39.18 radiation 40 4320 < th dose independent rect. 3 6
452 39.21 atmosphere 1005 43200 < th dose independent rect. 1 1
502 39.23 radiation 30 1440 < th dose dependent rect. 18 11
510 39.25 atmosphere 1005 43200 < th dose independent rect. 1 3
516 39.25 wind 9 43200 > th dose independent rect. 19 20
535 39.26 radiation 40 4320 < th dose dependent rect. 18 8
537 39.27 atmosphere 1005 43200 < th dose independent rect. 3 1
538 39.27 wind 7 43200 < th dose independent rect. 9 3
560 39.29 atmosphere 1005 43200 < th dose independent rect. 16 1
562 39.29 atmosphere 1005 43200 > th dose independent rect. 1 2
568 39.29 radiation 1 4320 > th dose dependent rect. 18 1
619 39.33 wind 9 43200 < th dose independent rect. 9 5
646 39.34 radiation 1 1440 > th dose dependent rect. 18 12
662 39.35 radiation 1 14400 < th dose dependent rect. 3 2
678 39.36 atmosphere 1005 43200 > th dose independent rect. 1 19
722 39.38 wind 9 43200 < th dose independent rect. 18 21
724 39.38 radiation 1 14400 < th dose dependent rect. 1 4
727 39.39 wind 7 43200 > th dose independent sin 4 NA
788 39.43 wind 7 43200 < th dose independent sin 4 NA
806 39.44 radiation 30 14400 > th dose independent rect. 7 1
833 39.44 atmosphere 1005 43200 < th dose independent rect. 1 23
859 39.46 humidity 90 43200 < th dose independent rect. 9 1
891 39.47 atmosphere 1005 43200 < th dose independent rect. 21 22
899 39.48 atmosphere 1005 43200 > th dose independent no NA NA
900 39.48 atmosphere 1005 43200 < th dose independent no NA NA
924 39.49 humidity 90 43200 > th dose independent rect. 9 1
934 39.49 atmosphere 1005 43200 > th dose independent rect. 15 23
997 39.51 humidity 80 43200 > th dose dependent rect. 10 1
998 39.51 radiation 1 14400 < th dose dependent rect. 6 2