Os01g0625900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0625900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF623, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.68 | 0.852 | 5.71 | 0.0186 | 0.194 | -1.66 | 0.775 | -3.08 | 0.439 | 12.8 | 1010 | 12001 | -- | -- |
| 360.76 | 0.885 | 5.82 | -1.06 | 0.14 | -1.72 | 0.898 | -- | 0.169 | 12.1 | 1009 | 12005 | -- | -- |
| 329.84 | 0.846 | 5.71 | 0.0501 | 0.247 | -1.65 | -- | -3.09 | 0.447 | 15.5 | 1010 | 11948 | -- | -- |
| 362.03 | 0.886 | 5.82 | -1.06 | 0.248 | -1.76 | -- | -- | 0.201 | 15.5 | 1009 | 11405 | -- | -- |
| 333.51 | 0.851 | 5.7 | 0.0341 | -- | -1.65 | -- | -3.07 | 0.442 | -- | 1010 | 11962 | -- | -- |
| 477.69 | 1.02 | 5.71 | -0.421 | 0.0665 | -- | 0.996 | -- | 0.705 | 10.3 | -- | -- | -- | -- |
| 479.22 | 1.03 | 5.71 | -0.373 | 0.219 | -- | -- | -- | 0.713 | 15.5 | -- | -- | -- | -- |
| 363.86 | 0.888 | 5.83 | -1.2 | -- | -1.83 | -- | -- | 0.123 | -- | 1013 | 11532 | -- | -- |
| 387.64 | 0.917 | 5.78 | -- | 0.252 | -1.56 | -- | -- | 0.372 | 15.8 | 1008 | 11476 | -- | -- |
| 481.91 | 1.03 | 5.71 | -0.382 | -- | -- | -- | -- | 0.707 | -- | -- | -- | -- | -- |
| 482.88 | 1.03 | 5.7 | -- | 0.227 | -- | -- | -- | 0.755 | 15.5 | -- | -- | -- | -- |
| 391.6 | 0.922 | 5.78 | -- | -- | -1.54 | -- | -- | 0.39 | -- | 1008 | 11529 | -- | -- |
| 485.76 | 1.03 | 5.7 | -- | -- | -- | -- | -- | 0.75 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.67 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 2 | 321.24 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 3 | 321.47 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 4 | 321.75 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 5 | 321.77 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 10 | 322.16 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 14 | 322.51 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 27 | 323.97 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 29 | 324.08 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 42 | 324.65 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 78 | 325.09 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 96 | 325.95 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 107 | 326.48 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 141 | 327.08 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 152 | 327.39 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 241 | 328.58 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 260 | 328.81 | atmosphere | 1010 | 14400 | > th | dose dependent | sin | 23 | NA |
| 261 | 328.82 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 265 | 328.84 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 294 | 329.04 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 13 | NA |
| 320 | 329.23 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 371 | 329.55 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 464 | 329.96 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 477 | 330.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 521 | 330.22 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 12 | NA |
| 537 | 330.29 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 597 | 330.49 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 600 | 330.50 | atmosphere | 1010 | 14400 | > th | dose dependent | no | NA | NA |
| 611 | 330.53 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 6 | 18 |
| 620 | 330.55 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 644 | 330.62 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 736 | 330.86 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 822 | 331.09 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 886 | 331.30 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 894 | 331.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 980 | 331.56 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 985 | 331.57 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 997 | 331.61 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 1000 | 331.62 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |